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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825840
Gene symbol: Krt5
Gene name: keratin 5
Probe: MGC clone 8116
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004799_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_01
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_01
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_01
Specimen euxassay_004799_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_02
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_02
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_02
Specimen euxassay_004799_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_03
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_03
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_03
Specimen euxassay_004799_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_04
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_04
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_04
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_04
Specimen euxassay_004799_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_05
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_05
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_05
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_05
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_05
Specimen euxassay_004799_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_06
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_06
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_06
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_06
TS23: oral epithelium Strong Regionally restricted euxassay_004799_06
Specimen euxassay_004799_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_07
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_07
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_07
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_07
TS23: thymus primordium Strong Spotted euxassay_004799_07
TS23: oral epithelium Strong Regionally restricted euxassay_004799_07
Specimen euxassay_004799_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_08
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_08
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_08
TS23: thymus primordium Strong Spotted euxassay_004799_08
TS23: pharynx Strong Regionally restricted euxassay_004799_08
TS23: esophagus Strong Regionally restricted euxassay_004799_08
TS23: oral epithelium Strong Regionally restricted euxassay_004799_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_08
Specimen euxassay_004799_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_09
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_09
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_09
TS23: thymus primordium Strong Spotted euxassay_004799_09
TS23: pharynx Strong Regionally restricted euxassay_004799_09
TS23: oral epithelium Strong Regionally restricted euxassay_004799_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_09
TS23: trachea Moderate Regionally restricted euxassay_004799_09
Specimen euxassay_004799_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_10
TS23: thymus primordium Strong Spotted euxassay_004799_10
TS23: pharynx Strong Regionally restricted euxassay_004799_10
TS23: lower jaw incisor Strong Regionally restricted euxassay_004799_10
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_10
TS23: oral epithelium Strong Regionally restricted euxassay_004799_10
TS23: bladder Moderate Regionally restricted euxassay_004799_10
TS23: urinary system Strong Regionally restricted euxassay_004799_10
TS23: urethra Present euxassay_004799_10 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_10
Specimen euxassay_004799_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_11
TS23: thymus primordium Strong Spotted euxassay_004799_11
TS23: pharynx Strong Regionally restricted euxassay_004799_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_004799_11
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_11
TS23: oral epithelium Strong Regionally restricted euxassay_004799_11
TS23: bladder Moderate Regionally restricted euxassay_004799_11
TS23: urinary system Strong Regionally restricted euxassay_004799_11
TS23: urethra Present euxassay_004799_11 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_11
Specimen euxassay_004799_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_12
TS23: pharynx Strong Regionally restricted euxassay_004799_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_004799_12
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_12
TS23: oral epithelium Strong Regionally restricted euxassay_004799_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_12
Specimen euxassay_004799_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_13
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_13
TS23: oral epithelium Strong Regionally restricted euxassay_004799_13
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_004799_13
Specimen euxassay_004799_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_14
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_004799_14
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_14
TS23: oral epithelium Strong Regionally restricted euxassay_004799_14
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_004799_14
Specimen euxassay_004799_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_15
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_004799_15
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_15
TS23: oral epithelium Strong Regionally restricted euxassay_004799_15
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_004799_15
Specimen euxassay_004799_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_16
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_004799_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_004799_16
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_16
TS23: oral epithelium Strong Regionally restricted euxassay_004799_16
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_004799_16
Specimen euxassay_004799_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_17
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_17
TS23: upper jaw molar Strong Regionally restricted euxassay_004799_17
TS23: lower jaw molar Strong Regionally restricted euxassay_004799_17
TS23: tongue epithelium Strong Regionally restricted euxassay_004799_17
TS23: oral epithelium Strong Regionally restricted euxassay_004799_17
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_004799_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_17
Specimen euxassay_004799_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_18
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_18
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_18
TS23: upper jaw molar Strong Regionally restricted euxassay_004799_18
TS23: oral epithelium Strong Regionally restricted euxassay_004799_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_18
Specimen euxassay_004799_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_19
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_19
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_19
TS23: oral epithelium Strong Regionally restricted euxassay_004799_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004799_19
Specimen euxassay_004799_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_20
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_20
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_20
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_20
TS23: oral epithelium Strong Regionally restricted euxassay_004799_20
Specimen euxassay_004799_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_21
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_21
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_21
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_21
Specimen euxassay_004799_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_22
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_004799_22
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_22
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_22
Specimen euxassay_004799_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_004799_23
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_23
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_23
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_004799_23
Specimen euxassay_004799_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: physiological umbilical hernia epidermis Strong Regionally restricted euxassay_004799_24
TS23: conjunctival sac Strong Regionally restricted euxassay_004799_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory