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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825830
Gene symbol: Krt18
Gene name: keratin 18
Probe: EH3297 probe 3234
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen 4B - Krt18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epithelium Present 4B Krt18
Specimen euxassay_011031_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_01
TS23: cochlea Moderate Regionally restricted euxassay_011031_01
TS23: lateral semicircular canal Moderate Regionally restricted euxassay_011031_01
TS23: saccule Moderate Regionally restricted euxassay_011031_01
TS23: optic stalk Moderate Regionally restricted euxassay_011031_01
Specimen euxassay_011031_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_02
TS23: cochlea Moderate Regionally restricted euxassay_011031_02
TS23: cornea epithelium Moderate Regionally restricted euxassay_011031_02
TS23: lung Strong Regionally restricted euxassay_011031_02
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_02
Specimen euxassay_011031_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_03
TS23: posterior semicircular canal Moderate Regionally restricted euxassay_011031_03
TS23: saccule Moderate Regionally restricted euxassay_011031_03
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_03
TS23: cornea epithelium Moderate Regionally restricted euxassay_011031_03
TS23: lung Strong Regionally restricted euxassay_011031_03
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_03
TS23: urinary system Strong Spotted euxassay_011031_03
TS23: mesonephros Present euxassay_011031_03
Specimen euxassay_011031_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_04
TS23: cochlea Moderate Regionally restricted euxassay_011031_04
TS23: saccule Moderate Regionally restricted euxassay_011031_04
TS23: posterior semicircular canal Moderate Regionally restricted euxassay_011031_04
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_04
TS23: cornea epithelium Moderate Regionally restricted euxassay_011031_04
TS23: lung Moderate Regionally restricted euxassay_011031_04
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_04
TS23: urinary system Strong Spotted euxassay_011031_04
TS23: mesonephros Present euxassay_011031_04
Specimen euxassay_011031_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_05
TS23: lateral semicircular canal Moderate Regionally restricted euxassay_011031_05
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_05
TS23: cochlea Moderate Regionally restricted euxassay_011031_05
TS23: cornea epithelium Strong Regionally restricted euxassay_011031_05
TS23: lung Strong Regionally restricted euxassay_011031_05
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_05
TS23: urinary system Strong Spotted euxassay_011031_05
TS23: mesonephros Present euxassay_011031_05
Specimen euxassay_011031_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_06
TS23: midgut Strong Regionally restricted euxassay_011031_06
TS23: cochlea Moderate Regionally restricted euxassay_011031_06
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_06
TS23: lateral semicircular canal Moderate Regionally restricted euxassay_011031_06
TS23: lung Strong Regionally restricted euxassay_011031_06
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_06
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_06
TS23: urinary system Strong Spotted euxassay_011031_06
TS23: mesonephros Present euxassay_011031_06
TS23: renal calyx Strong Regionally restricted euxassay_011031_06
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_06
Specimen euxassay_011031_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_07
TS23: midgut Strong Regionally restricted euxassay_011031_07
TS23: cochlea Moderate Regionally restricted euxassay_011031_07
TS23: saccule Moderate Regionally restricted euxassay_011031_07
TS23: lateral semicircular canal Moderate Regionally restricted euxassay_011031_07
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_07
TS23: lung Moderate Regionally restricted euxassay_011031_07
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_07
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_07
TS23: renal calyx Strong Regionally restricted euxassay_011031_07
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_07
Specimen euxassay_011031_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_08
TS23: midgut Moderate Regionally restricted euxassay_011031_08
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_08
TS23: cochlea Moderate Regionally restricted euxassay_011031_08
TS23: lung Moderate Regionally restricted euxassay_011031_08
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_08
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_08
TS23: renal pelvis Strong Regionally restricted euxassay_011031_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_011031_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_011031_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_08
TS23: pancreas Strong Regionally restricted euxassay_011031_08
Specimen euxassay_011031_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_09
TS23: stomach Strong Regionally restricted euxassay_011031_09
TS23: cochlea Moderate Regionally restricted euxassay_011031_09
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_09
TS23: lung Strong Regionally restricted euxassay_011031_09
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_09
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_09
TS23: renal pelvis Strong Regionally restricted euxassay_011031_09
TS23: renal calyx Strong Regionally restricted euxassay_011031_09
TS23: lower jaw molar Moderate Regionally restricted euxassay_011031_09
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011031_09
TS23: pancreas Strong Regionally restricted euxassay_011031_09
Specimen euxassay_011031_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_011031_10
TS23: midgut Moderate Regionally restricted euxassay_011031_10
TS23: lung Moderate Regionally restricted euxassay_011031_10
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_10
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_10
TS23: renal calyx Strong Regionally restricted euxassay_011031_10
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_10
TS23: sublingual gland primordium Strong Regionally restricted euxassay_011031_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_10
TS23: pancreas Strong Regionally restricted euxassay_011031_10
TS23: thymus primordium Strong Uniform euxassay_011031_10
TS23: thyroid gland Moderate Regionally restricted euxassay_011031_10
Specimen euxassay_011031_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_11
TS23: lung Moderate Regionally restricted euxassay_011031_11
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_11
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_11
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_11
TS23: sublingual gland primordium Strong Regionally restricted euxassay_011031_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_11
TS23: pancreas Strong Regionally restricted euxassay_011031_11
TS23: thymus primordium Strong Uniform euxassay_011031_11
TS23: thyroid gland Moderate Regionally restricted euxassay_011031_11
TS23: larynx Moderate Regionally restricted euxassay_011031_11
TS23: esophagus Moderate Regionally restricted euxassay_011031_11
TS23: pituitary gland Weak Regionally restricted euxassay_011031_11
Specimen euxassay_011031_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_12
TS23: lung Moderate Regionally restricted euxassay_011031_12
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_12
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011031_12
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_12
TS23: palatal shelf epithelium Moderate Regionally restricted euxassay_011031_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_12
TS23: thymus primordium Strong Uniform euxassay_011031_12
TS23: thyroid gland Moderate Regionally restricted euxassay_011031_12
TS23: larynx Moderate Regionally restricted euxassay_011031_12
TS23: esophagus Moderate Regionally restricted euxassay_011031_12
TS23: trachea Moderate Regionally restricted euxassay_011031_12
TS23: pituitary gland Weak Regionally restricted euxassay_011031_12
Specimen euxassay_011031_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_011031_13
TS23: hindgut Strong Regionally restricted euxassay_011031_13
TS23: rectum Strong Regionally restricted euxassay_011031_13
TS23: lung Strong Regionally restricted euxassay_011031_13
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_13
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_011031_13
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_13
TS23: palatal shelf epithelium Moderate Regionally restricted euxassay_011031_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011031_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_13
TS23: thymus primordium Strong Uniform euxassay_011031_13
TS23: larynx Moderate Regionally restricted euxassay_011031_13
TS23: esophagus Moderate Regionally restricted euxassay_011031_13
TS23: trachea Moderate Regionally restricted euxassay_011031_13
TS23: bladder fundus Strong Regionally restricted euxassay_011031_13
TS23: urethra Strong Regionally restricted euxassay_011031_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: nephric duct of male Strong Regionally restricted euxassay_011031_13
TS23: pituitary gland Weak Regionally restricted euxassay_011031_13
Specimen euxassay_011031_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_011031_14
TS23: rectum Strong Regionally restricted euxassay_011031_14
TS23: hindgut Strong Regionally restricted euxassay_011031_14
TS23: lung Strong Regionally restricted euxassay_011031_14
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_14
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_14
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_14
TS23: palatal shelf epithelium Moderate Regionally restricted euxassay_011031_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_011031_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_011031_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_14
TS23: naris Strong Regionally restricted euxassay_011031_14
TS23: pancreas Strong Regionally restricted euxassay_011031_14
TS23: thymus primordium Strong Uniform euxassay_011031_14
TS23: larynx Moderate Regionally restricted euxassay_011031_14
TS23: trachea Moderate Regionally restricted euxassay_011031_14
TS23: bladder fundus Strong Regionally restricted euxassay_011031_14
TS23: urethra Strong Regionally restricted euxassay_011031_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: nephric duct of male Strong Regionally restricted euxassay_011031_14
TS23: pituitary gland Moderate Regionally restricted euxassay_011031_14
Specimen euxassay_011031_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_15
TS23: hindgut Moderate Regionally restricted euxassay_011031_15
TS23: lung Strong Regionally restricted euxassay_011031_15
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_15
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_15
TS23: palatal shelf epithelium Moderate Regionally restricted euxassay_011031_15
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_15
TS23: pancreas Strong Regionally restricted euxassay_011031_15
TS23: thymus primordium Strong Uniform euxassay_011031_15
TS23: thyroid gland Moderate Regionally restricted euxassay_011031_15
TS23: urethra Moderate Regionally restricted euxassay_011031_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: pituitary gland Moderate Regionally restricted euxassay_011031_15
Specimen euxassay_011031_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_16
TS23: cochlea Weak Regionally restricted euxassay_011031_16
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_16
TS23: lung Moderate Regionally restricted euxassay_011031_16
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_16
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_16
TS23: renal calyx Strong Regionally restricted euxassay_011031_16
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_16
TS23: palatal shelf epithelium Moderate Regionally restricted euxassay_011031_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_16
TS23: pancreas Moderate Regionally restricted euxassay_011031_16
TS23: thyroid gland Weak Regionally restricted euxassay_011031_16
Specimen euxassay_011031_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_17
TS23: cochlea Moderate Regionally restricted euxassay_011031_17
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_17
TS23: lung Strong Regionally restricted euxassay_011031_17
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_17
TS23: renal calyx Strong Regionally restricted euxassay_011031_17
TS23: renal pelvis Strong Regionally restricted euxassay_011031_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_011031_17
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011031_17
TS23: palatal shelf epithelium Moderate Regionally restricted euxassay_011031_17
TS23: sublingual gland primordium Strong Regionally restricted euxassay_011031_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_17
TS23: naris Strong Regionally restricted euxassay_011031_17
TS23: pancreas Moderate Regionally restricted euxassay_011031_17
Specimen euxassay_011031_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_18
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_18
TS23: cochlea Moderate Regionally restricted euxassay_011031_18
TS23: saccule Moderate Regionally restricted euxassay_011031_18
TS23: lateral semicircular canal Moderate Regionally restricted euxassay_011031_18
TS23: lung Strong Regionally restricted euxassay_011031_18
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_18
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_18
TS23: renal pelvis Strong Regionally restricted euxassay_011031_18
TS23: renal calyx Strong Regionally restricted euxassay_011031_18
TS23: upper jaw incisor Moderate Regionally restricted euxassay_011031_18
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011031_18
TS23: oral epithelium Moderate Regionally restricted euxassay_011031_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_18
TS23: pancreas Moderate Regionally restricted euxassay_011031_18
Specimen euxassay_011031_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_19
TS23: cochlea Moderate Regionally restricted euxassay_011031_19
TS23: saccule Moderate Regionally restricted euxassay_011031_19
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011031_19
TS23: posterior semicircular canal Moderate Regionally restricted euxassay_011031_19
TS23: lung Strong Regionally restricted euxassay_011031_19
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_19
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_19
TS23: renal calyx Strong Regionally restricted euxassay_011031_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_011031_19
TS23: oral epithelium Weak Regionally restricted euxassay_011031_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_19
Specimen euxassay_011031_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_011031_20
TS23: cochlea Moderate Regionally restricted euxassay_011031_20
TS23: saccule Moderate Regionally restricted euxassay_011031_20
TS23: posterior semicircular canal Moderate Regionally restricted euxassay_011031_20
TS23: lung Strong Regionally restricted euxassay_011031_20
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_20
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_011031_20
TS23: urinary system Strong Spotted euxassay_011031_20
TS23: mesonephros Present euxassay_011031_20
TS23: renal calyx Strong Regionally restricted euxassay_011031_20
TS23: oral epithelium Weak Regionally restricted euxassay_011031_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_011031_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_011031_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_20
Specimen euxassay_011031_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cochlea Moderate Regionally restricted euxassay_011031_21
TS23: saccule Moderate Regionally restricted euxassay_011031_21
TS23: lung Strong Regionally restricted euxassay_011031_21
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_011031_21
TS23: urinary system Strong Spotted euxassay_011031_21
TS23: mesonephros Present euxassay_011031_21
TS23: oral epithelium Weak Regionally restricted euxassay_011031_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011031_21
TS23: olfactory epithelium Strong Regionally restricted euxassay_011031_21
Specimen euxassay_011031_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cochlea Moderate Regionally restricted euxassay_011031_22
TS23: lung Strong Regionally restricted euxassay_011031_22
TS23: urinary system Strong Spotted euxassay_011031_22
TS23: mesonephros Present euxassay_011031_22
Specimen euxassay_011031_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea epithelium Strong Regionally restricted euxassay_011031_23
TS23: lung Strong Regionally restricted euxassay_011031_23
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory