About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825671
Gene symbol: Jag1
Gene name: jagged 1
Probe: T63337
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S9 - Jag1: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: liver Present Single cells Expression is present in single cells in which the intercellular distance between stained cells is much larger than the cell diameter of an individual cell. A thumbnail photo of the staining is contained in the table.
Specimen euxassay_015945_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_015945_01
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_01
TS23: epidermis Moderate Regionally restricted euxassay_015945_01
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_015945_01
Specimen euxassay_015945_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_015945_02
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_02
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_015945_02
TS23: epidermis Moderate Regionally restricted euxassay_015945_02
Specimen euxassay_015945_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_015945_03
TS23: epidermis Moderate Regionally restricted euxassay_015945_03
Specimen euxassay_015945_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_015945_04
TS23: epidermis Moderate Regionally restricted euxassay_015945_04
Specimen euxassay_015945_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_05
TS23: epidermis Moderate Regionally restricted euxassay_015945_05
Specimen euxassay_015945_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_015945_06
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_06
TS23: epidermis Moderate Regionally restricted euxassay_015945_06
Specimen euxassay_015945_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_07
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_07
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_07
TS23: epidermis Moderate Regionally restricted euxassay_015945_07
Specimen euxassay_015945_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_08
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_08
TS23: metanephros Strong Regionally restricted euxassay_015945_08
TS23: pons ventricular layer Strong Single cells euxassay_015945_08
TS23: epidermis Weak Regionally restricted euxassay_015945_08
Specimen euxassay_015945_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_09
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_09
TS23: metanephros Strong Regionally restricted euxassay_015945_09
TS23: epidermis Weak Regionally restricted euxassay_015945_09
Specimen euxassay_015945_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_10
TS23: diencephalon lateral wall ventricular layer Strong Single cells euxassay_015945_10
TS23: metanephros Strong Regionally restricted euxassay_015945_10
TS23: aorta Weak Regionally restricted euxassay_015945_10
TS23: pons ventricular layer Weak Single cells euxassay_015945_10
TS23: medulla oblongata basal plate ventricular layer Weak Single cells euxassay_015945_10
TS23: epidermis Weak Regionally restricted euxassay_015945_10
Specimen euxassay_015945_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_11
TS23: pineal primordium Strong Single cells euxassay_015945_11
TS23: metanephros Strong Regionally restricted euxassay_015945_11
TS23: aorta Weak Regionally restricted euxassay_015945_11
TS23: epidermis Weak Regionally restricted euxassay_015945_11
Specimen euxassay_015945_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_12
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_12
TS23: aorta Weak Regionally restricted euxassay_015945_12
TS23: epidermis Weak Regionally restricted euxassay_015945_12
Specimen euxassay_015945_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_13
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_13
TS23: aorta Weak Regionally restricted euxassay_015945_13
TS23: pons ventricular layer Moderate Single cells euxassay_015945_13
TS23: medulla oblongata basal plate ventricular layer Moderate Single cells euxassay_015945_13
TS23: intermediate grey horn Moderate Single cells euxassay_015945_13
TS23: epidermis Weak Regionally restricted euxassay_015945_13
Specimen euxassay_015945_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_14
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_14
TS23: aorta Weak Regionally restricted euxassay_015945_14
TS23: pons ventricular layer Moderate Single cells euxassay_015945_14
TS23: intermediate grey horn Moderate Single cells euxassay_015945_14
TS23: epidermis Weak Regionally restricted euxassay_015945_14
Specimen euxassay_015945_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_015945_15
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_015945_15
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_15
TS23: aorta Weak Regionally restricted euxassay_015945_15
TS23: pons ventricular layer Weak Single cells euxassay_015945_15
TS23: intermediate grey horn Strong Single cells euxassay_015945_15
TS23: epidermis Weak Regionally restricted euxassay_015945_15
Specimen euxassay_015945_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_015945_16
TS23: midbrain ventricular layer Strong Single cells euxassay_015945_16
TS23: aorta Weak Regionally restricted euxassay_015945_16
TS23: epidermis Weak Regionally restricted euxassay_015945_16
Specimen euxassay_015945_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_17
TS23: metanephros Strong Regionally restricted euxassay_015945_17
TS23: epidermis Weak Regionally restricted euxassay_015945_17
Specimen euxassay_015945_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_015945_18
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_015945_18
TS23: epidermis Weak Regionally restricted euxassay_015945_18
Specimen euxassay_015945_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_015945_19
TS23: metanephros Moderate Regionally restricted euxassay_015945_19
TS23: epidermis Weak Regionally restricted euxassay_015945_19
Specimen euxassay_015945_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_015945_20
TS23: epidermis Weak Regionally restricted euxassay_015945_20
Specimen euxassay_015945_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_015945_21
TS23: metanephros Moderate Regionally restricted euxassay_015945_21
TS23: epidermis Weak Regionally restricted euxassay_015945_21
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_015945_21
Specimen euxassay_015945_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Weak Regionally restricted euxassay_015945_22
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_015945_22
Specimen euxassay_015945_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Weak Regionally restricted euxassay_015945_23
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_015945_23
TS23: lens Moderate Regionally restricted euxassay_015945_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory