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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825647
Gene symbol: Itga9
Gene name: integrin alpha 9
Probe: T37758
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011292_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_04
TS23: vibrissa Weak Regionally restricted euxassay_011292_04
Specimen euxassay_011292_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_05
TS23: stomach Moderate Regionally restricted euxassay_011292_05
TS23: vibrissa Weak Regionally restricted euxassay_011292_05
Specimen euxassay_011292_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_06
TS23: stomach Moderate Regionally restricted euxassay_011292_06
TS23: vibrissa Weak Regionally restricted euxassay_011292_06
Specimen euxassay_011292_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_07
TS23: testis Moderate Regionally restricted euxassay_011292_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_07
TS23: stomach Moderate Regionally restricted euxassay_011292_07
TS23: vibrissa Weak Regionally restricted euxassay_011292_07
Specimen euxassay_011292_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_08
TS23: testis Moderate Regionally restricted euxassay_011292_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_08
TS23: stomach Weak Regionally restricted euxassay_011292_08
TS23: metanephros Weak Regionally restricted euxassay_011292_08 There was weak expression in the excretory component.
TS23: pons mantle layer Weak Regionally restricted euxassay_011292_08 trigeminal motor nucleus
Specimen euxassay_011292_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_09
TS23: testis Moderate Regionally restricted euxassay_011292_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_09
TS23: stomach Weak Regionally restricted euxassay_011292_09
TS23: metanephros Weak Regionally restricted euxassay_011292_09 There was weak expression in the excretory component.
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011292_09 facial motor nucleus
Specimen euxassay_011292_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_10
TS23: stomach Weak Regionally restricted euxassay_011292_10
TS23: metanephros Weak Regionally restricted euxassay_011292_10 There was weak expression in the excretory component.
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011292_10 facial motor nucleus
Specimen euxassay_011292_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_11
TS23: stomach Weak Regionally restricted euxassay_011292_11
TS23: metanephros Weak Regionally restricted euxassay_011292_11 There was weak expression in the excretory component.
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011292_11 facial motor nucleus
Specimen euxassay_011292_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_12
TS23: metanephros Weak Regionally restricted euxassay_011292_12 There was weak expression in the excretory component.
Specimen euxassay_011292_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_13
TS23: metanephros Weak Regionally restricted euxassay_011292_13 There was weak expression in the excretory component.
Specimen euxassay_011292_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_14
Specimen euxassay_011292_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_15
Specimen euxassay_011292_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_16
Specimen euxassay_011292_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011292_17 facial motor nucleus
Specimen euxassay_011292_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_18
TS23: metanephros Weak Regionally restricted euxassay_011292_18 There was weak expression in the excretory component.
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011292_18 facial motor nucleus
Specimen euxassay_011292_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_19
TS23: metanephros Weak Regionally restricted euxassay_011292_19 There was weak expression in the excretory component.
TS23: pons mantle layer Weak Regionally restricted euxassay_011292_19 trigeminal motor nucleus
Specimen euxassay_011292_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_20
TS23: testis Moderate Regionally restricted euxassay_011292_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_20
TS23: metanephros Weak Regionally restricted euxassay_011292_20 There was weak expression in the excretory component.
Specimen euxassay_011292_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_21
TS23: testis Moderate Regionally restricted euxassay_011292_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_011292_21
TS23: metanephros Weak Regionally restricted euxassay_011292_21 There was weak expression in the excretory component.
TS23: vibrissa Weak Regionally restricted euxassay_011292_21
Specimen euxassay_011292_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_22
TS23: testis Moderate Regionally restricted euxassay_011292_22
TS23: metanephros Weak Regionally restricted euxassay_011292_22 There was weak expression in the excretory component.
TS23: vibrissa Weak Regionally restricted euxassay_011292_22
Specimen euxassay_011292_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: testis Moderate Regionally restricted euxassay_011292_23
TS23: metanephros Weak Regionally restricted euxassay_011292_23 There was weak expression in the excretory component.
TS23: vibrissa Weak Regionally restricted euxassay_011292_23
Specimen euxassay_011292_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011292_24
TS23: testis Moderate Regionally restricted euxassay_011292_24
TS23: vibrissa Weak Regionally restricted euxassay_011292_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory