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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825626
Gene symbol: Irx5
Gene name: Iroquois homeobox 5
Probe: IMAGE clone 1511139
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007520_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_01
TS23: femur Strong Regionally restricted euxassay_007520_01
TS23: fibula Strong Regionally restricted euxassay_007520_01
TS23: tibia Strong Regionally restricted euxassay_007520_01
TS23: humerus Strong Regionally restricted euxassay_007520_01
TS23: scapula Strong Regionally restricted euxassay_007520_01
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_01
TS23: skin Strong Regionally restricted euxassay_007520_01
TS23: cranium Strong Regionally restricted euxassay_007520_01
Specimen euxassay_007520_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_02
TS23: femur Strong Regionally restricted euxassay_007520_02
TS23: tibia Strong Regionally restricted euxassay_007520_02
TS23: fibula Strong Regionally restricted euxassay_007520_02
TS23: humerus Strong Regionally restricted euxassay_007520_02
TS23: scapula Strong Regionally restricted euxassay_007520_02
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_02
TS23: skin Strong Regionally restricted euxassay_007520_02
TS23: cranium Strong Regionally restricted euxassay_007520_02
Specimen euxassay_007520_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_03
TS23: femur Strong Regionally restricted euxassay_007520_03
TS23: foot Strong Regionally restricted euxassay_007520_03
TS23: scapula Strong Regionally restricted euxassay_007520_03
TS23: humerus Strong Regionally restricted euxassay_007520_03
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_03
TS23: skin Strong Regionally restricted euxassay_007520_03
TS23: cranium Strong Regionally restricted euxassay_007520_03
Specimen euxassay_007520_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_04
TS23: femur Strong Regionally restricted euxassay_007520_04
TS23: humerus Moderate Regionally restricted euxassay_007520_04
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_04
TS23: skin Strong Regionally restricted euxassay_007520_04
TS23: cranium Strong Regionally restricted euxassay_007520_04
Specimen euxassay_007520_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_05
TS23: axial skeleton Strong Regionally restricted euxassay_007520_05
TS23: femur Strong Regionally restricted euxassay_007520_05
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_05
TS23: skin Strong Regionally restricted euxassay_007520_05
TS23: cranium Strong Regionally restricted euxassay_007520_05
Specimen euxassay_007520_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_06
TS23: axial skeleton Strong Regionally restricted euxassay_007520_06
TS23: femur Moderate Regionally restricted euxassay_007520_06
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_06
TS23: skin Strong Regionally restricted euxassay_007520_06
TS23: cranium Strong Regionally restricted euxassay_007520_06
Specimen euxassay_007520_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_007520_07
TS23: axial skeleton Strong Regionally restricted euxassay_007520_07
TS23: femur Moderate Regionally restricted euxassay_007520_07
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_007520_07
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_07
TS23: skin Strong Regionally restricted euxassay_007520_07
TS23: cranium Strong Regionally restricted euxassay_007520_07
Specimen euxassay_007520_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_08
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_007520_08
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_08
TS23: skin Strong Regionally restricted euxassay_007520_08
TS23: cranium Strong Regionally restricted euxassay_007520_08
Specimen euxassay_007520_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_09
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_09
TS23: skin Strong Regionally restricted euxassay_007520_09
TS23: cranium Strong Regionally restricted euxassay_007520_09
Specimen euxassay_007520_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_10
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_10
TS23: skin Strong Regionally restricted euxassay_007520_10
TS23: cranium Strong Regionally restricted euxassay_007520_10
Specimen euxassay_007520_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_11
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_11
TS23: skin Strong Regionally restricted euxassay_007520_11
TS23: cranium Strong Regionally restricted euxassay_007520_11
Specimen euxassay_007520_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_12
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_12
TS23: skin Strong Regionally restricted euxassay_007520_12
TS23: cranium Strong Regionally restricted euxassay_007520_12
Specimen euxassay_007520_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_13
TS23: skin Strong Regionally restricted euxassay_007520_13
TS23: cranium Strong Regionally restricted euxassay_007520_13
Specimen euxassay_007520_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_14
TS23: skin Strong Regionally restricted euxassay_007520_14
TS23: cranium Strong Regionally restricted euxassay_007520_14
Specimen euxassay_007520_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_15
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_007520_15
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_15
TS23: skin Strong Regionally restricted euxassay_007520_15
TS23: cranium Strong Regionally restricted euxassay_007520_15
Specimen euxassay_007520_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_007520_16
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_007520_16
TS23: skin Strong Regionally restricted euxassay_007520_16
TS23: cranium Strong Regionally restricted euxassay_007520_16
Specimen euxassay_007520_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_17
TS23: femur Strong Regionally restricted euxassay_007520_17
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_17
TS23: skin Strong Regionally restricted euxassay_007520_17
TS23: cranium Strong Regionally restricted euxassay_007520_17
Specimen euxassay_007520_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_18
TS23: femur Strong Regionally restricted euxassay_007520_18
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_18
TS23: skin Strong Regionally restricted euxassay_007520_18
TS23: cranium Strong Regionally restricted euxassay_007520_18
Specimen euxassay_007520_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_19
TS23: femur Strong Regionally restricted euxassay_007520_19
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_19
TS23: skin Strong Regionally restricted euxassay_007520_19
TS23: cranium Strong Regionally restricted euxassay_007520_19
Specimen euxassay_007520_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_20
TS23: femur Strong Regionally restricted euxassay_007520_20
TS23: humerus Moderate Regionally restricted euxassay_007520_20
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_20
TS23: skin Strong Regionally restricted euxassay_007520_20
TS23: cranium Strong Regionally restricted euxassay_007520_20
Specimen euxassay_007520_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_21
TS23: femur Strong Regionally restricted euxassay_007520_21
TS23: fibula Strong Regionally restricted euxassay_007520_21
TS23: tibia Strong Regionally restricted euxassay_007520_21
TS23: humerus Moderate Regionally restricted euxassay_007520_21
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_21
TS23: skin Strong Regionally restricted euxassay_007520_21
TS23: cranium Strong Regionally restricted euxassay_007520_21
Specimen euxassay_007520_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_22
TS23: tibia Strong Regionally restricted euxassay_007520_22
TS23: fibula Strong Regionally restricted euxassay_007520_22
TS23: femur Strong Regionally restricted euxassay_007520_22
TS23: humerus Strong Regionally restricted euxassay_007520_22
TS23: Meckel's cartilage Strong Regionally restricted euxassay_007520_22
TS23: skin Strong Regionally restricted euxassay_007520_22
TS23: cranium Strong Regionally restricted euxassay_007520_22
Specimen euxassay_007520_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_007520_23
TS23: fibula Strong Regionally restricted euxassay_007520_23
TS23: tibia Strong Regionally restricted euxassay_007520_23
TS23: femur Strong Regionally restricted euxassay_007520_23
TS23: humerus Strong Regionally restricted euxassay_007520_23
TS23: skin Strong Regionally restricted euxassay_007520_23
TS23: cranium Strong Regionally restricted euxassay_007520_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory