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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825588
Gene symbol: Ina
Gene name: internexin neuronal intermediate filament protein, alpha
Probe: T31317
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012424_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_012424_01
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_01
TS23: stomach Moderate Regionally restricted euxassay_012424_01
Specimen euxassay_012424_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_012424_02
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_02
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_02
TS23: stomach Moderate Regionally restricted euxassay_012424_02
Specimen euxassay_012424_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_03
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_03
TS23: stomach Strong Regionally restricted euxassay_012424_03
Specimen euxassay_012424_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_04
TS23: facial ganglion Strong Regionally restricted euxassay_012424_04
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_04
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_04
TS23: stomach Strong Regionally restricted euxassay_012424_04
Specimen euxassay_012424_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_05
TS23: facial ganglion Strong Regionally restricted euxassay_012424_05
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_05
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_05
TS23: stomach Strong Regionally restricted euxassay_012424_05
Specimen euxassay_012424_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_012424_06
TS23: facial ganglion Strong Regionally restricted euxassay_012424_06
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_06
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_06
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_06
TS23: midbrain mantle layer Strong Uniform euxassay_012424_06
TS23: pons mantle layer Strong Uniform euxassay_012424_06
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_06
TS23: stomach Strong Regionally restricted euxassay_012424_06
Specimen euxassay_012424_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_07
TS23: facial ganglion Strong Regionally restricted euxassay_012424_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_012424_07
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_07
TS23: midbrain mantle layer Strong Uniform euxassay_012424_07
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_07
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_07
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_07
TS23: pons mantle layer Strong Uniform euxassay_012424_07
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_07
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_07
TS23: stomach Strong Regionally restricted euxassay_012424_07
Specimen euxassay_012424_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_012424_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_08
TS23: trigeminal nerve Strong Regionally restricted euxassay_012424_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_012424_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_08
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_08
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_08
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_08
TS23: midbrain mantle layer Strong Uniform euxassay_012424_08
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_08
TS23: pons mantle layer Strong Uniform euxassay_012424_08
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_08
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_08
TS23: midgut Strong Regionally restricted euxassay_012424_08
TS23: stomach Strong Regionally restricted euxassay_012424_08
Specimen euxassay_012424_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_09
TS23: cervical ganglion Strong Regionally restricted euxassay_012424_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_09
TS23: midbrain mantle layer Strong Uniform euxassay_012424_09
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_09
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_09
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_09
TS23: pons mantle layer Strong Uniform euxassay_012424_09
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_09
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_09
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_09
TS23: stomach Strong Regionally restricted euxassay_012424_09
TS23: midgut Strong Regionally restricted euxassay_012424_09
Specimen euxassay_012424_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_10
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_012424_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_10
TS23: vomeronasal organ Strong Regionally restricted euxassay_012424_10
TS23: midbrain mantle layer Strong Uniform euxassay_012424_10
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_10
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_10
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_10
TS23: pons mantle layer Strong Uniform euxassay_012424_10
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_10
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_10
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_10
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_10
TS23: midgut Strong Regionally restricted euxassay_012424_10
TS23: stomach Strong Regionally restricted euxassay_012424_10
Specimen euxassay_012424_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_012424_11
TS23: midbrain mantle layer Strong Uniform euxassay_012424_11
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_11
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_11
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_11
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_11
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_11
TS23: pons mantle layer Strong Uniform euxassay_012424_11
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_11
TS23: midgut Strong Regionally restricted euxassay_012424_11
Specimen euxassay_012424_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Strong Regionally restricted euxassay_012424_12
TS23: vomeronasal organ Strong Regionally restricted euxassay_012424_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_12
TS23: midbrain mantle layer Strong Uniform euxassay_012424_12
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_12
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_12
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_12
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_12
TS23: pons mantle layer Strong Uniform euxassay_012424_12
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_12
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_12
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_12
TS23: midgut Strong Regionally restricted euxassay_012424_12
Specimen euxassay_012424_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Strong Regionally restricted euxassay_012424_13
TS23: vomeronasal organ Strong Regionally restricted euxassay_012424_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_13
TS23: midbrain mantle layer Strong Uniform euxassay_012424_13
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_13
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_13
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_13
TS23: pons mantle layer Strong Uniform euxassay_012424_13
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_13
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_13
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_13
TS23: stomach Strong Regionally restricted euxassay_012424_13
Specimen euxassay_012424_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_012424_14
TS23: midbrain mantle layer Strong Uniform euxassay_012424_14
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_14
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_14
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_14
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_14
TS23: pons mantle layer Strong Uniform euxassay_012424_14
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_14
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_14
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_14
TS23: midgut Strong Regionally restricted euxassay_012424_14
Specimen euxassay_012424_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_012424_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012424_15
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_15
TS23: hypothalamus mantle layer Strong Uniform euxassay_012424_15
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_15
TS23: midbrain mantle layer Strong Uniform euxassay_012424_15
TS23: pons mantle layer Strong Uniform euxassay_012424_15
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_15
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_15
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_15
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_15
TS23: midgut Strong Regionally restricted euxassay_012424_15
Specimen euxassay_012424_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_012424_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_16
TS23: cervical ganglion Strong Regionally restricted euxassay_012424_16
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_012424_16
TS23: midbrain mantle layer Strong Uniform euxassay_012424_16
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_16
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_012424_16
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_16
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_16
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_16
TS23: pons mantle layer Strong Uniform euxassay_012424_16
TS23: spinal cord mantle layer Strong Uniform euxassay_012424_16
TS23: midgut Moderate Regionally restricted euxassay_012424_16
Specimen euxassay_012424_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_012424_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_012424_17
TS23: facial ganglion Strong Regionally restricted euxassay_012424_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_17
TS23: midbrain mantle layer Strong Uniform euxassay_012424_17
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_17
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_17
TS23: pons mantle layer Strong Uniform euxassay_012424_17
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_012424_17
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_17
Specimen euxassay_012424_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_18
TS23: facial ganglion Strong Regionally restricted euxassay_012424_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_012424_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_012424_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012424_18
TS23: midbrain mantle layer Strong Uniform euxassay_012424_18
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_18
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_012424_18
TS23: pons mantle layer Strong Uniform euxassay_012424_18
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_18
Specimen euxassay_012424_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Regionally restricted euxassay_012424_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_19
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_19
TS23: midbrain mantle layer Strong Uniform euxassay_012424_19
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_19
Specimen euxassay_012424_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_012424_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012424_20
TS23: facial ganglion Strong Regionally restricted euxassay_012424_20
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_20
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_20
Specimen euxassay_012424_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_012424_21
TS23: telencephalon mantle layer Strong Uniform euxassay_012424_21
TS23: metencephalon rest of alar plate mantle layer Strong Uniform euxassay_012424_21
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory