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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825549
Gene symbol: Igsf9
Gene name: immunoglobulin superfamily, member 9
Probe: IMAGE clone 2135504
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005660_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_01
Specimen euxassay_005660_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_02
Specimen euxassay_005660_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_03
TS23: saccule Moderate Regionally restricted euxassay_005660_03
TS23: utricle Moderate Regionally restricted euxassay_005660_03
TS23: stomach Moderate Regionally restricted euxassay_005660_03
Specimen euxassay_005660_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_04
TS23: vibrissa Moderate Regionally restricted euxassay_005660_04
TS23: saccule Moderate Regionally restricted euxassay_005660_04
TS23: utricle Moderate Regionally restricted euxassay_005660_04
TS23: stomach Moderate Regionally restricted euxassay_005660_04
Specimen euxassay_005660_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_05
TS23: vibrissa Moderate Regionally restricted euxassay_005660_05
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_05
TS23: stomach Moderate Regionally restricted euxassay_005660_05
Specimen euxassay_005660_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_06
TS23: vibrissa Moderate Regionally restricted euxassay_005660_06
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_005660_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_005660_06
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005660_06
TS23: saccule Moderate Regionally restricted euxassay_005660_06
TS23: utricle Moderate Regionally restricted euxassay_005660_06
TS23: stomach Moderate Regionally restricted euxassay_005660_06
Specimen euxassay_005660_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_07
TS23: vibrissa Moderate Regionally restricted euxassay_005660_07
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_005660_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005660_07
TS23: metanephros Moderate Regionally restricted euxassay_005660_07
TS23: saccule Moderate Regionally restricted euxassay_005660_07
TS23: utricle Moderate Regionally restricted euxassay_005660_07
TS23: stomach Moderate Regionally restricted euxassay_005660_07
Specimen euxassay_005660_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_08
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_08
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_08
TS23: pharynx epithelium Moderate Regionally restricted euxassay_005660_08
TS23: metanephros Moderate Regionally restricted euxassay_005660_08
TS23: tongue epithelium Moderate Regionally restricted euxassay_005660_08
TS23: stomach Moderate Regionally restricted euxassay_005660_08
TS23: midgut Moderate Regionally restricted euxassay_005660_08
Specimen euxassay_005660_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_09
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_09
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_09
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_09
TS23: pharynx epithelium Moderate Regionally restricted euxassay_005660_09
TS23: esophagus epithelium Moderate Regionally restricted euxassay_005660_09
TS23: adenohypophysis Weak Regionally restricted euxassay_005660_09
TS23: tongue epithelium Moderate Regionally restricted euxassay_005660_09
TS23: midgut Moderate Regionally restricted euxassay_005660_09
TS23: stomach Moderate Regionally restricted euxassay_005660_09
Specimen euxassay_005660_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_10
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_10
TS23: upper jaw incisor Moderate Regionally restricted euxassay_005660_10
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_10
TS23: pharynx epithelium Moderate Regionally restricted euxassay_005660_10
TS23: adenohypophysis Weak Regionally restricted euxassay_005660_10
TS23: tongue epithelium Moderate Regionally restricted euxassay_005660_10
TS23: midgut Moderate Regionally restricted euxassay_005660_10
Specimen euxassay_005660_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_005660_11
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_11
TS23: pharynx epithelium Moderate Regionally restricted euxassay_005660_11
TS23: adenohypophysis Weak Regionally restricted euxassay_005660_11
TS23: tongue epithelium Moderate Regionally restricted euxassay_005660_11
TS23: midgut Moderate Regionally restricted euxassay_005660_11
Specimen euxassay_005660_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_12
TS23: naris Moderate Regionally restricted euxassay_005660_12
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_005660_12
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_12
TS23: pharynx epithelium Moderate Regionally restricted euxassay_005660_12
TS23: adenohypophysis Weak Regionally restricted euxassay_005660_12
TS23: tongue epithelium Moderate Regionally restricted euxassay_005660_12
TS23: midgut Moderate Regionally restricted euxassay_005660_12
TS23: bladder Moderate Regionally restricted euxassay_005660_12
Specimen euxassay_005660_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Moderate Regionally restricted euxassay_005660_13
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_005660_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_13
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_13
TS23: adenohypophysis Weak Regionally restricted euxassay_005660_13
TS23: tongue epithelium Moderate Regionally restricted euxassay_005660_13
TS23: midgut Moderate Regionally restricted euxassay_005660_13
TS23: bladder Moderate Regionally restricted euxassay_005660_13
Specimen euxassay_005660_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Moderate Regionally restricted euxassay_005660_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_14
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_005660_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_005660_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_005660_14
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_14
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005660_14
TS23: midgut Moderate Regionally restricted euxassay_005660_14
TS23: rectum Moderate Regionally restricted euxassay_005660_14
TS23: urethra Moderate Regionally restricted euxassay_005660_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_005660_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Moderate Regionally restricted euxassay_005660_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_15
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_005660_15
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_15
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_005660_15
TS23: saccule Moderate Regionally restricted euxassay_005660_15
TS23: utricle Moderate Regionally restricted euxassay_005660_15
TS23: midgut Moderate Regionally restricted euxassay_005660_15
TS23: urethra Moderate Regionally restricted euxassay_005660_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_005660_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_16
TS23: naris Moderate Regionally restricted euxassay_005660_16
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_16
TS23: lower jaw molar Moderate Regionally restricted euxassay_005660_16
TS23: upper jaw molar Moderate Regionally restricted euxassay_005660_16
TS23: midgut Moderate Regionally restricted euxassay_005660_16
Specimen euxassay_005660_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_17
TS23: lower jaw molar Moderate Regionally restricted euxassay_005660_17
TS23: upper jaw molar Moderate Regionally restricted euxassay_005660_17
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_17
TS23: saccule Moderate Regionally restricted euxassay_005660_17
TS23: utricle Moderate Regionally restricted euxassay_005660_17
TS23: midgut Moderate Regionally restricted euxassay_005660_17
Specimen euxassay_005660_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_005660_18
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_18
TS23: vibrissa Moderate Regionally restricted euxassay_005660_18
TS23: oral epithelium Moderate Regionally restricted euxassay_005660_18
TS23: metanephros Weak Regionally restricted euxassay_005660_18
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_18
TS23: saccule Moderate Regionally restricted euxassay_005660_18
TS23: utricle Moderate Regionally restricted euxassay_005660_18
Specimen euxassay_005660_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_19
TS23: vibrissa Moderate Regionally restricted euxassay_005660_19
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_19
TS23: saccule Moderate Regionally restricted euxassay_005660_19
TS23: utricle Moderate Regionally restricted euxassay_005660_19
Specimen euxassay_005660_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_20
TS23: vibrissa Moderate Regionally restricted euxassay_005660_20
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_20
TS23: saccule Moderate Regionally restricted euxassay_005660_20
TS23: utricle Moderate Regionally restricted euxassay_005660_20
Specimen euxassay_005660_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_21
TS23: vibrissa Moderate Regionally restricted euxassay_005660_21
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_21
Specimen euxassay_005660_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Moderate Regionally restricted euxassay_005660_22
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_005660_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory