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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825402
Gene symbol: Hnf4a
Gene name: hepatic nuclear factor 4, alpha
Probe: MGC clone 31368
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005745_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_01
TS23: midgut Strong Regionally restricted euxassay_005745_01
Specimen euxassay_005745_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_02
TS23: midgut Strong Regionally restricted euxassay_005745_02
Specimen euxassay_005745_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_03
TS23: midgut Strong Regionally restricted euxassay_005745_03
Specimen euxassay_005745_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_04
TS23: midgut Strong Regionally restricted euxassay_005745_04
Specimen euxassay_005745_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_05
TS23: midgut Strong Regionally restricted euxassay_005745_05
TS23: metanephros Moderate Spotted euxassay_005745_05
Specimen euxassay_005745_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_06
TS23: midgut Strong Regionally restricted euxassay_005745_06
TS23: metanephros Moderate Spotted euxassay_005745_06
Specimen euxassay_005745_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_07
TS23: midgut Strong Regionally restricted euxassay_005745_07
TS23: metanephros Moderate Spotted euxassay_005745_07
Specimen euxassay_005745_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_08
TS23: midgut Strong Regionally restricted euxassay_005745_08
TS23: metanephros Strong Spotted euxassay_005745_08
Specimen euxassay_005745_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_09
TS23: midgut Strong Regionally restricted euxassay_005745_09
TS23: metanephros Strong Spotted euxassay_005745_09
Specimen euxassay_005745_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_10
TS23: midgut Strong Regionally restricted euxassay_005745_10
Specimen euxassay_005745_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_11
TS23: midgut Moderate Regionally restricted euxassay_005745_11
Specimen euxassay_005745_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_12
TS23: midgut Moderate Regionally restricted euxassay_005745_12
TS23: rectum Moderate Regionally restricted euxassay_005745_12
Specimen euxassay_005745_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_13
TS23: midgut Strong Regionally restricted euxassay_005745_13
Specimen euxassay_005745_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_14
TS23: midgut Strong Regionally restricted euxassay_005745_14
Specimen euxassay_005745_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_15
Specimen euxassay_005745_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_16
TS23: metanephros Strong Spotted euxassay_005745_16
Specimen euxassay_005745_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_17
TS23: metanephros Strong Spotted euxassay_005745_17
Specimen euxassay_005745_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_18
TS23: metanephros Strong Spotted euxassay_005745_18
Specimen euxassay_005745_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_19
Specimen euxassay_005745_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_005745_20
Specimen euxassay_005745_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_21
Specimen euxassay_005745_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_005745_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory