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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825395
Gene symbol: Hmgn1
Gene name: high mobility group nucleosomal binding domain 1
Probe: MGC clone 103397
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003511_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_01
Specimen euxassay_003511_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_02
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_02
Specimen euxassay_003511_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_03
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_03
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_03
Specimen euxassay_003511_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_04
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_04
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_04
Specimen euxassay_003511_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_05
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_05
TS23: cochlea Strong Regionally restricted euxassay_003511_05
Specimen euxassay_003511_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_06
TS23: cochlea Strong Regionally restricted euxassay_003511_06
Specimen euxassay_003511_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_07
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_07
TS23: cochlea Strong Regionally restricted euxassay_003511_07
TS23: renal calyx Weak Regionally restricted euxassay_003511_07
Specimen euxassay_003511_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_08
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_08
TS23: cochlea Strong Regionally restricted euxassay_003511_08
TS23: renal calyx Weak Regionally restricted euxassay_003511_08
Specimen euxassay_003511_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003511_09
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_09
TS23: cochlea Strong Regionally restricted euxassay_003511_09
TS23: renal calyx Weak Regionally restricted euxassay_003511_09
Specimen euxassay_003511_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003511_10
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_10
TS23: renal calyx Weak Regionally restricted euxassay_003511_10
Specimen euxassay_003511_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003511_11
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_11
Specimen euxassay_003511_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003511_14
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_14
Specimen euxassay_003511_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003511_15
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_15
Specimen euxassay_003511_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003511_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_16
Specimen euxassay_003511_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_17
TS23: renal calyx Weak Regionally restricted euxassay_003511_17
Specimen euxassay_003511_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_18
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_18
TS23: cochlea Strong Regionally restricted euxassay_003511_18
TS23: renal calyx Moderate Regionally restricted euxassay_003511_18
Specimen euxassay_003511_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_19
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_19
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_19
TS23: cochlea Strong Regionally restricted euxassay_003511_19
TS23: renal calyx Moderate Regionally restricted euxassay_003511_19
Specimen euxassay_003511_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_20
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_20
TS23: cochlea Strong Regionally restricted euxassay_003511_20
Specimen euxassay_003511_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_21
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_21
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_21
TS23: cochlea Strong Regionally restricted euxassay_003511_21
Specimen euxassay_003511_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_22
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_22
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_22
TS23: cochlea Strong Regionally restricted euxassay_003511_22
Specimen euxassay_003511_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_003511_23
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_23
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_23
Specimen euxassay_003511_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_003511_24
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003511_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory