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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825308
Gene symbol: H2-Oa
Gene name: histocompatibility 2, O region alpha locus
Probe: T1912
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007269_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea Moderate Regionally restricted euxassay_007269_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_01
Specimen euxassay_007269_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea Moderate Regionally restricted euxassay_007269_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_02
Specimen euxassay_007269_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea Moderate Regionally restricted euxassay_007269_03
TS23: vibrissa Moderate Regionally restricted euxassay_007269_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_03
Specimen euxassay_007269_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_007269_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_04
Specimen euxassay_007269_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_007269_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007269_05
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_05
Specimen euxassay_007269_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007269_06
TS23: metanephros Moderate Regionally restricted euxassay_007269_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007269_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_06
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_06
Specimen euxassay_007269_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007269_07
TS23: metanephros Weak Regionally restricted euxassay_007269_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_007269_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007269_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_07
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007269_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_07
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_07
Specimen euxassay_007269_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007269_08
TS23: metanephros Weak Regionally restricted euxassay_007269_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_007269_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007269_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007269_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_08
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_08
Specimen euxassay_007269_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: sublingual gland primordium Moderate Regionally restricted euxassay_007269_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007269_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007269_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007269_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_09
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_09
TS23: bladder Weak Regionally restricted euxassay_007269_09
TS23: palatal shelf Weak Regionally restricted euxassay_007269_09
Specimen euxassay_007269_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_10
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_10
TS23: ventral grey horn Strong Regionally restricted euxassay_007269_10
TS23: bladder Weak Regionally restricted euxassay_007269_10
TS23: nephric duct of male Weak Regionally restricted euxassay_007269_10
TS23: palatal shelf Weak Regionally restricted euxassay_007269_10
Specimen euxassay_007269_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_11
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_11
TS23: ventral grey horn Strong Regionally restricted euxassay_007269_11
TS23: bladder Weak Regionally restricted euxassay_007269_11
TS23: palatal shelf Weak Regionally restricted euxassay_007269_11
Specimen euxassay_007269_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_12
TS23: ventral grey horn Strong Regionally restricted euxassay_007269_12
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_12
TS23: bladder Weak Regionally restricted euxassay_007269_12
TS23: nephric duct of male Weak Regionally restricted euxassay_007269_12
TS23: palatal shelf Weak Regionally restricted euxassay_007269_12
Specimen euxassay_007269_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_13
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_13
TS23: ventral grey horn Strong Regionally restricted euxassay_007269_13
TS23: bladder Weak Regionally restricted euxassay_007269_13
TS23: palatal shelf Weak Regionally restricted euxassay_007269_13
Specimen euxassay_007269_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Weak Regionally restricted euxassay_007269_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_14
TS23: ventral grey horn Strong Regionally restricted euxassay_007269_14
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_14
Specimen euxassay_007269_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: sublingual gland primordium Weak Regionally restricted euxassay_007269_15
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007269_15
TS23: metanephros Weak Regionally restricted euxassay_007269_15
TS23: trigeminal ganglion Weak Regionally restricted euxassay_007269_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_15
TS23: ventral grey horn Strong Regionally restricted euxassay_007269_15
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_15
Specimen euxassay_007269_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007269_16
TS23: metanephros Moderate Regionally restricted euxassay_007269_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_007269_16
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007269_16
Specimen euxassay_007269_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007269_17
TS23: metanephros Moderate Regionally restricted euxassay_007269_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_007269_17
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_17
Specimen euxassay_007269_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_007269_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007269_18
TS23: metanephros Moderate Regionally restricted euxassay_007269_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_18
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_18
Specimen euxassay_007269_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_007269_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007269_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007269_19
TS23: pons mantle layer Strong Regionally restricted euxassay_007269_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory