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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825234
Gene symbol: Grin3a
Gene name: glutamate receptor ionotropic, NMDA3A
Probe: T40443
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015836_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_015836_01
Specimen euxassay_015836_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_015836_02
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_015836_02
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_015836_02
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_015836_02
TS23: hand mesenchyme Moderate Regionally restricted euxassay_015836_02
Specimen euxassay_015836_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_015836_03
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_015836_03
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_015836_03
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_015836_03
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_015836_03
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_015836_03
Specimen euxassay_015836_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_015836_04
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_015836_04
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_015836_04
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_015836_04
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_015836_04
Specimen euxassay_015836_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_015836_05
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_015836_05
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_015836_05
Specimen euxassay_015836_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_06
TS23: upper jaw molar Weak Regionally restricted euxassay_015836_06
TS23: lower jaw molar Weak Regionally restricted euxassay_015836_06
Specimen euxassay_015836_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_07
TS23: upper jaw molar Weak Regionally restricted euxassay_015836_07
TS23: lower jaw molar Weak Regionally restricted euxassay_015836_07
Specimen euxassay_015836_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_08
Specimen euxassay_015836_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_09
Specimen euxassay_015836_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_10
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_10
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_10
TS23: ventral grey horn Strong Regionally restricted euxassay_015836_10
TS23: palatal shelf Moderate Regionally restricted euxassay_015836_10
Specimen euxassay_015836_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_11
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_11
TS23: ventral grey horn Strong Regionally restricted euxassay_015836_11
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_11
TS23: thymus primordium Weak Regionally restricted euxassay_015836_11
TS23: palatal shelf Weak Regionally restricted euxassay_015836_11
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_015836_11
Specimen euxassay_015836_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_12
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_12
TS23: ventral grey horn Strong Regionally restricted euxassay_015836_12
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_12
TS23: thymus primordium Weak Regionally restricted euxassay_015836_12
TS23: palatal shelf Weak Regionally restricted euxassay_015836_12
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_015836_12
Specimen euxassay_015836_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_13
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_13
TS23: thymus primordium Weak Regionally restricted euxassay_015836_13
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_015836_13
Specimen euxassay_015836_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_14
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_14
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_14
TS23: ventral grey horn Strong Regionally restricted euxassay_015836_14
TS23: thymus primordium Weak Regionally restricted euxassay_015836_14
Specimen euxassay_015836_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_15
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_15
TS23: ventral grey horn Strong Regionally restricted euxassay_015836_15
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_15
TS23: thymus primordium Weak Regionally restricted euxassay_015836_15
Specimen euxassay_015836_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_16
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_16
TS23: dorsal grey horn Strong Regionally restricted euxassay_015836_16
Specimen euxassay_015836_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_015836_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_17
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_17
Specimen euxassay_015836_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_18
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_015836_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_015836_18
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_015836_18
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_015836_18
Specimen euxassay_015836_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_19
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_015836_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_015836_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_015836_19
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_015836_19
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_015836_19
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_015836_19
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_015836_19
TS23: hindlimb digit 2 metatarsal Strong Regionally restricted euxassay_015836_19
TS23: hindlimb digit 3 metatarsal Strong Regionally restricted euxassay_015836_19
TS23: hindlimb digit 4 metatarsal Strong Regionally restricted euxassay_015836_19
Specimen euxassay_015836_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_20
TS23: pons mantle layer Strong Regionally restricted euxassay_015836_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_015836_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_015836_20
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_015836_20
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_015836_20
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_015836_20
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_015836_20
Specimen euxassay_015836_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015836_21
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_015836_21
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_015836_21
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_015836_21
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_015836_21
TS23: hand mesenchyme Moderate Regionally restricted euxassay_015836_21
Specimen euxassay_015836_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015836_22
TS23: hand mesenchyme Moderate Regionally restricted euxassay_015836_22
Specimen euxassay_015836_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_23
TS23: hand mesenchyme Moderate Regionally restricted euxassay_015836_23
Specimen euxassay_015836_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015836_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory