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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825233
Gene symbol: Grin2a
Gene name: glutamate receptor, ionotropic, NMDA2A (epsilon 1)
Probe: T45080
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_016594_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_016594_01
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_016594_01
TS23: cranial muscle Moderate Regionally restricted euxassay_016594_01
Specimen euxassay_016594_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_016594_02
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_016594_02
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_016594_02
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_02
TS23: cranial muscle Weak Regionally restricted euxassay_016594_02
Specimen euxassay_016594_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foot mesenchyme Moderate Regionally restricted euxassay_016594_03
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_03
TS23: cranial muscle Weak Regionally restricted euxassay_016594_03
Specimen euxassay_016594_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_04
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_04
Specimen euxassay_016594_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_05
TS23: pons mantle layer Weak Regionally restricted euxassay_016594_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016594_05
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_05
Specimen euxassay_016594_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016594_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016594_06
TS23: pons mantle layer Weak Regionally restricted euxassay_016594_06
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_06
Specimen euxassay_016594_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016594_07
TS23: pons mantle layer Weak Regionally restricted euxassay_016594_07
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016594_07
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_07
Specimen euxassay_016594_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_08
TS23: pons mantle layer Weak Regionally restricted euxassay_016594_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_016594_08
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016594_08
Specimen euxassay_016594_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_09
Specimen euxassay_016594_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_10
TS23: tail mesenchyme Weak Regionally restricted euxassay_016594_10
Specimen euxassay_016594_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_11
TS23: tail mesenchyme Moderate Regionally restricted euxassay_016594_11
Specimen euxassay_016594_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_12
TS23: tail mesenchyme Moderate Regionally restricted euxassay_016594_12
Specimen euxassay_016594_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_13
TS23: tail mesenchyme Moderate Regionally restricted euxassay_016594_13
Specimen euxassay_016594_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_016594_14
Specimen euxassay_016594_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016594_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_15
TS23: tail mesenchyme Weak Regionally restricted euxassay_016594_15
Specimen euxassay_016594_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016594_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016594_16
TS23: pons mantle layer Weak Regionally restricted euxassay_016594_16
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016594_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_016594_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_016594_16
TS23: tail mesenchyme Weak Regionally restricted euxassay_016594_16
Specimen euxassay_016594_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016594_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016594_20
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016594_20
TS23: pons mantle layer Weak Regionally restricted euxassay_016594_20
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_20
TS23: cranial muscle Weak Regionally restricted euxassay_016594_20
Specimen euxassay_016594_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016594_21
TS23: hand mesenchyme Moderate Regionally restricted euxassay_016594_21
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_21
TS23: cranial muscle Weak Regionally restricted euxassay_016594_21
Specimen euxassay_016594_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_016594_22
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_016594_22
TS23: cranial muscle Moderate Regionally restricted euxassay_016594_22
Specimen euxassay_016594_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_016594_23
TS23: cranial muscle Moderate Regionally restricted euxassay_016594_23
Specimen euxassay_016594_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_016594_24
TS23: cranial muscle Moderate Regionally restricted euxassay_016594_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory