About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825118
Gene symbol: Col6a5
Gene name: collagen, type VI, alpha 5
Probe: T39606
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015988_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_015988_01
Specimen euxassay_015988_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_015988_02
Specimen euxassay_015988_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: esophagus Strong Regionally restricted euxassay_015988_11
Specimen euxassay_015988_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: esophagus Strong Regionally restricted euxassay_015988_12
Specimen euxassay_015988_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: esophagus Strong Regionally restricted euxassay_015988_13
Specimen euxassay_015988_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_015988_23
Specimen euxassay_015988_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_015988_24
Specimen euxassay_015988_25: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_015988_25
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory