About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825073
Gene symbol: Gli3
Gene name: GLI-Kruppel family member GLI3
Probe: MH1026 probe 879
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018378_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_018378_01
Specimen euxassay_018378_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forelimb digit 1 phalanx Moderate Regionally restricted euxassay_018378_03
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_018378_03
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_03
Specimen euxassay_018378_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_04
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_018378_04
TS23: forelimb digit 1 phalanx Moderate Regionally restricted euxassay_018378_04
Specimen euxassay_018378_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_05
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_018378_05
TS23: forelimb digit 1 phalanx Moderate Regionally restricted euxassay_018378_05
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_05
Specimen euxassay_018378_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_06
TS23: forelimb digit 1 phalanx Moderate Regionally restricted euxassay_018378_06
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_018378_06
TS23: foot mesenchyme Weak Regionally restricted euxassay_018378_06
Specimen euxassay_018378_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_07
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018378_07
Specimen euxassay_018378_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018378_08
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_018378_08
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_018378_08
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_08
Specimen euxassay_018378_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018378_09
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_018378_09
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_09
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_018378_09
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_018378_09
Specimen euxassay_018378_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018378_10
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_018378_10
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_018378_10
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_10
Specimen euxassay_018378_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018378_11
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_018378_11
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_018378_11
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_018378_11
Specimen euxassay_018378_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_018378_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_018378_12
Specimen euxassay_018378_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018378_13
Specimen euxassay_018378_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018378_14
Specimen euxassay_018378_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_15
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_018378_15
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_018378_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_018378_15
Specimen euxassay_018378_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_16
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_018378_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_018378_16
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_018378_16
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_018378_16
TS23: axial skeleton tail region Weak Regionally restricted euxassay_018378_16
Specimen euxassay_018378_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_17
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_018378_17
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_018378_17
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_018378_17
TS23: axial skeleton tail region Weak Regionally restricted euxassay_018378_17
Specimen euxassay_018378_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_18
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_018378_18
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_018378_18
TS23: axial skeleton tail region Weak Regionally restricted euxassay_018378_18
Specimen euxassay_018378_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton tail region Weak Regionally restricted euxassay_018378_19
Specimen euxassay_018378_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_20
TS23: axial skeleton tail region Weak Regionally restricted euxassay_018378_20
Specimen euxassay_018378_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_21
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_018378_21
Specimen euxassay_018378_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_018378_22
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_22
Specimen euxassay_018378_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_23
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_018378_23
Specimen euxassay_018378_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018378_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory