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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824995
Gene symbol: Garnl3
Gene name: GTPase activating RANGAP domain-like 3
Probe: T36418
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009037_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_009037_03
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_03
Specimen euxassay_009037_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Regionally restricted euxassay_009037_04 trigeminal motor nucleus
TS23: ventral grey horn Moderate Single cells euxassay_009037_04
TS23: trigeminal ganglion Moderate Single cells euxassay_009037_04
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_009037_04
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_04
Specimen euxassay_009037_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Regionally restricted euxassay_009037_05 trigeminal motor nucleus
TS23: ventral grey horn Moderate Single cells euxassay_009037_05
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_009037_05
TS23: trigeminal ganglion Moderate Single cells euxassay_009037_05
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_05
Specimen euxassay_009037_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate marginal layer Weak Regionally restricted euxassay_009037_06 facial motor nucleus
TS23: ventral grey horn Moderate Single cells euxassay_009037_06
TS23: vagus ganglion Moderate Single cells euxassay_009037_06
TS23: trigeminal ganglion Moderate Single cells euxassay_009037_06
Specimen euxassay_009037_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_009037_07 facial motor nucleus
TS23: ventral grey horn Moderate Single cells euxassay_009037_07
TS23: trigeminal ganglion Moderate Single cells euxassay_009037_07
Specimen euxassay_009037_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Single cells euxassay_009037_08
Specimen euxassay_009037_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Single cells euxassay_009037_09
TS23: trigeminal nerve Moderate Single cells euxassay_009037_09
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_09
Specimen euxassay_009037_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Single cells euxassay_009037_10
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_10
Specimen euxassay_009037_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_11
Specimen euxassay_009037_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009037_12 facial motor nucleus
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_12
Specimen euxassay_009037_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009037_13 facial motor nucleus
TS23: dorsal root ganglion Moderate Single cells euxassay_009037_13
Specimen euxassay_009037_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_009037_14 facial motor nucleus
TS23: vagus ganglion Moderate Single cells euxassay_009037_14
Specimen euxassay_009037_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_009037_15 trigeminal motor nucleus
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_009037_15
Specimen euxassay_009037_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_009037_16
TS23: trigeminal nerve Moderate Single cells euxassay_009037_16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory