About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824917
Gene symbol: Foxp4
Gene name: forkhead box P4
Probe: IMAGE clone 1152368
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001657_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_001657_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_01
Specimen euxassay_001657_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_001657_02
TS23: stomach Weak Regionally restricted euxassay_001657_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_02
Specimen euxassay_001657_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_03
TS23: rib Weak Regionally restricted euxassay_001657_03
TS23: stomach Weak Regionally restricted euxassay_001657_03
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_03
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_03
Specimen euxassay_001657_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_04
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_04
TS23: rib Weak Regionally restricted euxassay_001657_04
TS23: stomach Weak Regionally restricted euxassay_001657_04
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_04
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_04
Specimen euxassay_001657_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_05
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_05
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_05
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_05
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_001657_05
TS23: stomach Moderate Regionally restricted euxassay_001657_05
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_05
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_05
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_05
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_05
Specimen euxassay_001657_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_06
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_06
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_06
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_001657_06
TS23: stomach Moderate Regionally restricted euxassay_001657_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_06
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_06
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_06
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_06
Specimen euxassay_001657_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_07
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_07
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_07
TS23: axial skeleton Moderate Regionally restricted euxassay_001657_07
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_001657_07
TS23: stomach Weak Regionally restricted euxassay_001657_07
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_07
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_07
Specimen euxassay_001657_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_08
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_08
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_08
TS23: axial skeleton Moderate Regionally restricted euxassay_001657_08
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_001657_08
TS23: stomach Weak Regionally restricted euxassay_001657_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_08
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_08
Specimen euxassay_001657_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_09
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_09
TS23: axial skeleton Moderate Regionally restricted euxassay_001657_09
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_001657_09
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_09
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_09
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_09
Specimen euxassay_001657_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_10
TS23: axial skeleton Moderate Regionally restricted euxassay_001657_10
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_10
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_10
Specimen euxassay_001657_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_11
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_001657_11
TS23: axial skeleton Weak Regionally restricted euxassay_001657_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_001657_11
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_11
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_11
Specimen euxassay_001657_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_12
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_12
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_001657_12
TS23: axial skeleton Weak Regionally restricted euxassay_001657_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_001657_12
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_12
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_12
Specimen euxassay_001657_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_13
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_13
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_13
TS23: axial skeleton Moderate Regionally restricted euxassay_001657_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_001657_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_13
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_13
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_13
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_13
Specimen euxassay_001657_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_14
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_14
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_14
TS23: axial skeleton Moderate Regionally restricted euxassay_001657_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_001657_14
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_14
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_14
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_14
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_14
Specimen euxassay_001657_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_15
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_15
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_001657_15
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_15
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_15
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_15
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_15
Specimen euxassay_001657_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_16
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_16
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_16
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_001657_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_16
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_16
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_16
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_16
Specimen euxassay_001657_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_17
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_17
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_17
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_17
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_001657_17
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_001657_17
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_001657_17
TS23: hindlimb digit 5 mesenchyme Strong Regionally restricted euxassay_001657_17
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_17
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_17
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001657_17
Specimen euxassay_001657_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001657_18
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_18
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_001657_18
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_18
TS23: hindlimb digit 1 mesenchyme Strong Regionally restricted euxassay_001657_18
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_001657_18
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_001657_18
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_001657_18
TS23: hindlimb digit 5 mesenchyme Strong Regionally restricted euxassay_001657_18
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_18
TS23: basisphenoid bone Moderate Regionally restricted euxassay_001657_18
TS23: basioccipital bone Moderate Regionally restricted euxassay_001657_18
Specimen euxassay_001657_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_19
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_001657_19
TS23: hindlimb digit 1 mesenchyme Strong Regionally restricted euxassay_001657_19
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_001657_19
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_001657_19
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_001657_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_19
Specimen euxassay_001657_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_001657_20
TS23: rib Weak Regionally restricted euxassay_001657_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001657_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory