About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824881
Gene symbol: Flrt3
Gene name: fibronectin leucine rich transmembrane protein 3
Probe: MGC clone 62414
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006295_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006295_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_01
Specimen euxassay_006295_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006295_02
TS23: eyelid Moderate Regionally restricted euxassay_006295_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_02
Specimen euxassay_006295_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006295_03
TS23: eyelid Moderate Regionally restricted euxassay_006295_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_03
Specimen euxassay_006295_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_006295_04
TS23: eyelid Moderate Regionally restricted euxassay_006295_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_04
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_04
Specimen euxassay_006295_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_006295_05
TS23: maxilla Strong Regionally restricted euxassay_006295_05
TS23: eyelid Moderate Regionally restricted euxassay_006295_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_05
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006295_05
Specimen euxassay_006295_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_006295_06
TS23: maxilla Moderate Regionally restricted euxassay_006295_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_06
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006295_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_06
Specimen euxassay_006295_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_006295_07
TS23: vibrissa Moderate Regionally restricted euxassay_006295_07
TS23: metanephros Weak Regionally restricted euxassay_006295_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_07
TS23: pons marginal layer Moderate Regionally restricted euxassay_006295_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006295_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_07
Specimen euxassay_006295_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006295_08
TS23: metanephros Weak Regionally restricted euxassay_006295_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006295_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_08
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_006295_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_08
Specimen euxassay_006295_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Moderate Regionally restricted euxassay_006295_09
TS23: lower jaw molar Moderate Regionally restricted euxassay_006295_09
TS23: vibrissa Moderate Regionally restricted euxassay_006295_09
TS23: metanephros Weak Regionally restricted euxassay_006295_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006295_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_006295_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006295_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_09
TS23: upper lip Weak Regionally restricted euxassay_006295_09
Specimen euxassay_006295_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006295_10
TS23: metanephros Weak Regionally restricted euxassay_006295_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_006295_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_006295_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_006295_10
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_006295_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_10
TS23: upper lip Weak Regionally restricted euxassay_006295_10
TS23: lower lip Weak Regionally restricted euxassay_006295_10
Specimen euxassay_006295_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006295_11
TS23: pituitary gland Moderate Regionally restricted euxassay_006295_11
TS23: metanephros Weak Regionally restricted euxassay_006295_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_006295_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_006295_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_006295_11
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_006295_11
Specimen euxassay_006295_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_006295_12
TS23: pituitary gland Moderate Regionally restricted euxassay_006295_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006295_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_006295_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_006295_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_12
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_006295_12
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_006295_12
Specimen euxassay_006295_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006295_13
TS23: vibrissa Moderate Regionally restricted euxassay_006295_13
TS23: pituitary gland Moderate Regionally restricted euxassay_006295_13
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006295_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006295_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006295_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006295_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_006295_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006295_13
TS23: upper lip Weak Regionally restricted euxassay_006295_13
TS23: lower lip Weak Regionally restricted euxassay_006295_13
TS23: bladder Weak Regionally restricted euxassay_006295_13
Specimen euxassay_006295_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006295_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006295_14
TS23: pituitary gland Moderate Regionally restricted euxassay_006295_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006295_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006295_14
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006295_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006295_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_006295_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006295_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006295_14
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_006295_14
TS23: upper lip Weak Regionally restricted euxassay_006295_14
TS23: lower lip Weak Regionally restricted euxassay_006295_14
TS23: bladder Weak Regionally restricted euxassay_006295_14
Specimen euxassay_006295_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006295_15
TS23: pituitary gland Moderate Regionally restricted euxassay_006295_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_006295_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_006295_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_006295_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006295_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006295_15
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_006295_15
TS23: lower lip Weak Regionally restricted euxassay_006295_15
TS23: upper lip Weak Regionally restricted euxassay_006295_15
TS23: bladder Weak Regionally restricted euxassay_006295_15
Specimen euxassay_006295_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Moderate Regionally restricted euxassay_006295_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_006295_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_006295_16
TS23: pons mantle layer Weak Regionally restricted euxassay_006295_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_16
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_006295_16
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006295_16
TS23: upper lip Weak Regionally restricted euxassay_006295_16
TS23: lower lip Weak Regionally restricted euxassay_006295_16
Specimen euxassay_006295_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006295_17
TS23: metanephros Weak Regionally restricted euxassay_006295_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_17
TS23: pons ventricular layer Weak Regionally restricted euxassay_006295_17
TS23: pons mantle layer Weak Regionally restricted euxassay_006295_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006295_17
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006295_17
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006295_17
TS23: lower lip Moderate Regionally restricted euxassay_006295_17
Specimen euxassay_006295_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006295_18
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006295_18
TS23: metanephros Weak Regionally restricted euxassay_006295_18
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006295_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006295_18
TS23: pons mantle layer Weak Regionally restricted euxassay_006295_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_006295_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_18
TS23: lower lip Weak Regionally restricted euxassay_006295_18
TS23: upper lip Weak Regionally restricted euxassay_006295_18
Specimen euxassay_006295_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006295_19
TS23: upper jaw molar Weak Regionally restricted euxassay_006295_19
TS23: lower jaw molar Weak Regionally restricted euxassay_006295_19
TS23: metanephros Weak Regionally restricted euxassay_006295_19
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_19
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_006295_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_19
TS23: upper lip Weak Regionally restricted euxassay_006295_19
TS23: lower lip Weak Regionally restricted euxassay_006295_19
Specimen euxassay_006295_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006295_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_006295_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_006295_20
TS23: metanephros Weak Regionally restricted euxassay_006295_20
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_20
TS23: submandibular gland primordium Weak Regionally restricted euxassay_006295_20
TS23: upper lip Weak Regionally restricted euxassay_006295_20
TS23: lower lip Weak Regionally restricted euxassay_006295_20
Specimen euxassay_006295_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006295_21
TS23: mandible Weak Regionally restricted euxassay_006295_21
TS23: vibrissa Moderate Regionally restricted euxassay_006295_21
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_21
TS23: upper lip Weak Regionally restricted euxassay_006295_21
TS23: lower lip Weak Regionally restricted euxassay_006295_21
Specimen euxassay_006295_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006295_22
TS23: mandible Weak Regionally restricted euxassay_006295_22
TS23: vibrissa Moderate Regionally restricted euxassay_006295_22
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_22
TS23: upper lip Weak Regionally restricted euxassay_006295_22
Specimen euxassay_006295_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006295_23
TS23: mandible Strong Regionally restricted euxassay_006295_23
TS23: vibrissa Moderate Regionally restricted euxassay_006295_23
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006295_23
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_006295_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory