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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824717
Gene symbol: Zc2hc1a
Gene name: zinc finger, C2HC-type containing 1A
Probe: IMAGE clone 2064672
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000836_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Moderate Uniform euxassay_000836_01
Specimen euxassay_000836_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Moderate Uniform euxassay_000836_02
Specimen euxassay_000836_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Moderate Uniform euxassay_000836_03
Specimen euxassay_000836_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000836_04
TS23: telencephalon Moderate Uniform euxassay_000836_04
Specimen euxassay_000836_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000836_05
TS23: facial ganglion Strong Uniform euxassay_000836_05
TS23: telencephalon Moderate Uniform euxassay_000836_05
TS23: metencephalon Moderate Uniform euxassay_000836_05
Specimen euxassay_000836_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000836_06
TS23: trigeminal ganglion Strong Uniform euxassay_000836_06
TS23: vestibular ganglion Strong Uniform euxassay_000836_06
TS23: metencephalon Moderate Uniform euxassay_000836_06
TS23: telencephalon Moderate Uniform euxassay_000836_06
TS23: midbrain Moderate Uniform euxassay_000836_06
TS23: hindbrain Moderate Uniform euxassay_000836_06
Specimen euxassay_000836_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibular ganglion Strong Uniform euxassay_000836_07
TS23: cochlear ganglion Strong Uniform euxassay_000836_07
TS23: trigeminal ganglion Strong Uniform euxassay_000836_07
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000836_07
TS23: telencephalon Moderate Uniform euxassay_000836_07
TS23: midbrain Moderate Uniform euxassay_000836_07
TS23: metencephalon Moderate Uniform euxassay_000836_07
TS23: hindbrain Moderate Uniform euxassay_000836_07
Specimen euxassay_000836_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000836_08
TS23: facial ganglion Strong Uniform euxassay_000836_08
TS23: superior glossopharyngeal ganglion Strong Uniform euxassay_000836_08
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000836_08
TS23: cochlear ganglion Strong Uniform euxassay_000836_08
TS23: vestibular ganglion Strong Uniform euxassay_000836_08
TS23: diencephalon Moderate Uniform euxassay_000836_08
TS23: telencephalon Moderate Uniform euxassay_000836_08
TS23: medulla oblongata Moderate Uniform euxassay_000836_08
TS23: metencephalon Moderate Uniform euxassay_000836_08
TS23: midbrain Moderate Uniform euxassay_000836_08
TS23: hindbrain Moderate Uniform euxassay_000836_08
Specimen euxassay_000836_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_09
TS23: vestibular ganglion Strong Uniform euxassay_000836_09
TS23: cochlear ganglion Strong Uniform euxassay_000836_09
TS23: trigeminal ganglion Strong Uniform euxassay_000836_09
TS23: vagus ganglion Strong Uniform euxassay_000836_09
TS23: midbrain Moderate Uniform euxassay_000836_09
TS23: metencephalon Moderate Uniform euxassay_000836_09
TS23: medulla oblongata Moderate Uniform euxassay_000836_09
TS23: telencephalon Moderate Uniform euxassay_000836_09
TS23: diencephalon Moderate Uniform euxassay_000836_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_09
Specimen euxassay_000836_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_10
TS23: vagus ganglion Strong Uniform euxassay_000836_10
TS23: trigeminal ganglion Strong Uniform euxassay_000836_10
TS23: midbrain Moderate Uniform euxassay_000836_10
TS23: metencephalon Moderate Uniform euxassay_000836_10
TS23: telencephalon Moderate Uniform euxassay_000836_10
TS23: diencephalon Moderate Uniform euxassay_000836_10
TS23: medulla oblongata Moderate Uniform euxassay_000836_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_10
Specimen euxassay_000836_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_11
TS23: vagus ganglion Strong Uniform euxassay_000836_11
TS23: metencephalon Moderate Uniform euxassay_000836_11
TS23: telencephalon Moderate Uniform euxassay_000836_11
TS23: diencephalon Moderate Uniform euxassay_000836_11
TS23: spinal cord Moderate Uniform euxassay_000836_11
TS23: midbrain Moderate Uniform euxassay_000836_11
TS23: medulla oblongata Moderate Uniform euxassay_000836_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_11
TS23: hindbrain Moderate Uniform euxassay_000836_11
Specimen euxassay_000836_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_12
TS23: midbrain Moderate Uniform euxassay_000836_12
TS23: metencephalon Moderate Uniform euxassay_000836_12
TS23: spinal cord Moderate Uniform euxassay_000836_12
TS23: medulla oblongata Moderate Uniform euxassay_000836_12
TS23: telencephalon Moderate Uniform euxassay_000836_12
TS23: diencephalon Moderate Uniform euxassay_000836_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_12
TS23: hindbrain Moderate Uniform euxassay_000836_12
Specimen euxassay_000836_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_13
TS23: spinal cord Moderate Uniform euxassay_000836_13
TS23: midbrain Moderate Uniform euxassay_000836_13
TS23: metencephalon Moderate Uniform euxassay_000836_13
TS23: medulla oblongata Moderate Uniform euxassay_000836_13
TS23: telencephalon Moderate Uniform euxassay_000836_13
TS23: diencephalon Moderate Uniform euxassay_000836_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_13
TS23: hindbrain Moderate Uniform euxassay_000836_13
Specimen euxassay_000836_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_14
TS23: spinal cord Moderate Uniform euxassay_000836_14
TS23: midbrain Moderate Uniform euxassay_000836_14
TS23: metencephalon Moderate Uniform euxassay_000836_14
TS23: medulla oblongata Moderate Uniform euxassay_000836_14
TS23: telencephalon Moderate Uniform euxassay_000836_14
TS23: diencephalon Moderate Uniform euxassay_000836_14
TS23: hindbrain Moderate Uniform euxassay_000836_14
Specimen euxassay_000836_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_15
TS23: spinal cord Moderate Uniform euxassay_000836_15
TS23: midbrain Moderate Uniform euxassay_000836_15
TS23: metencephalon Moderate Uniform euxassay_000836_15
TS23: medulla oblongata Moderate Uniform euxassay_000836_15
TS23: telencephalon Moderate Uniform euxassay_000836_15
TS23: diencephalon Moderate Uniform euxassay_000836_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_15
TS23: hindbrain Moderate Uniform euxassay_000836_15
Specimen euxassay_000836_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_000836_16
TS23: midbrain Moderate Uniform euxassay_000836_16
TS23: metencephalon Moderate Uniform euxassay_000836_16
TS23: medulla oblongata Moderate Uniform euxassay_000836_16
TS23: telencephalon Moderate Uniform euxassay_000836_16
TS23: diencephalon Moderate Uniform euxassay_000836_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_16
TS23: hindbrain Moderate Uniform euxassay_000836_16
Specimen euxassay_000836_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_17
TS23: vagus ganglion Strong Uniform euxassay_000836_17
TS23: trigeminal ganglion Strong Uniform euxassay_000836_17
TS23: midbrain Moderate Uniform euxassay_000836_17
TS23: metencephalon Moderate Uniform euxassay_000836_17
TS23: medulla oblongata Moderate Uniform euxassay_000836_17
TS23: telencephalon Moderate Uniform euxassay_000836_17
TS23: diencephalon Moderate Uniform euxassay_000836_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_17
TS23: hindbrain Moderate Uniform euxassay_000836_17
Specimen euxassay_000836_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_18
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000836_18
TS23: superior glossopharyngeal ganglion Strong Uniform euxassay_000836_18
TS23: cochlear ganglion Strong Uniform euxassay_000836_18
TS23: vestibular ganglion Strong Uniform euxassay_000836_18
TS23: trigeminal ganglion Strong Uniform euxassay_000836_18
TS23: metencephalon Moderate Uniform euxassay_000836_18
TS23: medulla oblongata Moderate Uniform euxassay_000836_18
TS23: telencephalon Moderate Uniform euxassay_000836_18
TS23: diencephalon Moderate Uniform euxassay_000836_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_18
TS23: hindbrain Moderate Uniform euxassay_000836_18
TS23: midbrain Moderate Uniform euxassay_000836_18
Specimen euxassay_000836_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_19
TS23: metencephalon Moderate Uniform euxassay_000836_19
TS23: midbrain Moderate Uniform euxassay_000836_19
TS23: telencephalon Moderate Uniform euxassay_000836_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000836_19
Specimen euxassay_000836_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000836_20
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000836_20
TS23: cochlear ganglion Strong Uniform euxassay_000836_20
TS23: vestibular ganglion Strong Uniform euxassay_000836_20
TS23: facial ganglion Strong Uniform euxassay_000836_20
TS23: trigeminal ganglion Strong Uniform euxassay_000836_20
TS23: metencephalon Moderate Uniform euxassay_000836_20
TS23: telencephalon Moderate Uniform euxassay_000836_20
Specimen euxassay_000836_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibular ganglion Strong Uniform euxassay_000836_21
TS23: facial ganglion Strong Uniform euxassay_000836_21
TS23: trigeminal ganglion Strong Uniform euxassay_000836_21
TS23: metencephalon Moderate Uniform euxassay_000836_21
TS23: telencephalon Moderate Uniform euxassay_000836_21
Specimen euxassay_000836_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000836_22
TS23: trigeminal ganglion Strong Uniform euxassay_000836_22
TS23: metencephalon Moderate Uniform euxassay_000836_22
TS23: telencephalon Moderate Uniform euxassay_000836_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory