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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824696
Gene symbol: Dennd6b
Gene name: DENN domain containing 6B
Probe: IMAGE clone 888834
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000502_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Weak Regionally restricted euxassay_000502_02
TS23: trigeminal ganglion Weak Uniform euxassay_000502_02
TS23: metencephalon alar plate Weak Regionally restricted euxassay_000502_02
Specimen euxassay_000502_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon Moderate Regionally restricted euxassay_000502_03
TS23: metencephalon alar plate Moderate Regionally restricted euxassay_000502_03
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000502_03
TS23: corpus striatum Moderate Regionally restricted euxassay_000502_03
TS23: midbrain Moderate Regionally restricted euxassay_000502_03
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000502_03
TS23: trigeminal ganglion Strong Uniform euxassay_000502_03
Specimen euxassay_000502_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: corpus striatum Strong Regionally restricted euxassay_000502_04
TS23: telencephalon Strong Regionally restricted euxassay_000502_04
TS23: basal ganglia Present euxassay_000502_04
TS23: cerebellum Strong Regionally restricted euxassay_000502_04
TS23: metencephalon rest of alar plate Strong Regionally restricted euxassay_000502_04
TS23: pons Strong Regionally restricted euxassay_000502_04
TS23: medulla oblongata Strong Regionally restricted euxassay_000502_04
TS23: midbrain tegmentum Strong Uniform euxassay_000502_04
TS23: midbrain lateral wall Strong Uniform euxassay_000502_04
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000502_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000502_04
Specimen euxassay_000502_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epithalamus Strong Regionally restricted euxassay_000502_06
TS23: hypothalamus Strong Regionally restricted euxassay_000502_06
TS23: diencephalon lateral wall Strong Regionally restricted euxassay_000502_06
TS23: corpus striatum Strong Regionally restricted euxassay_000502_06
TS23: midbrain lateral wall Strong Regionally restricted euxassay_000502_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_000502_06
TS23: midbrain marginal layer Strong Regionally restricted euxassay_000502_06
TS23: spinal cord Strong Graded euxassay_000502_06
Specimen euxassay_000502_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Graded euxassay_000502_07
TS23: pons Strong Regionally restricted euxassay_000502_07
TS23: metencephalon sulcus limitans Strong Regionally restricted euxassay_000502_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_000502_07
TS23: thalamus Moderate Regionally restricted euxassay_000502_07
Specimen euxassay_000502_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus Moderate Regionally restricted euxassay_000502_09
TS23: corpus striatum Moderate Regionally restricted euxassay_000502_09
TS23: pons Moderate Regionally restricted euxassay_000502_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_000502_09
TS23: spinal cord Moderate Regionally restricted euxassay_000502_09
Specimen euxassay_000502_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain marginal layer Strong Regionally restricted euxassay_000502_10
TS23: midbrain tegmentum Strong Regionally restricted euxassay_000502_10
TS23: thalamus Strong Regionally restricted euxassay_000502_10
TS23: hypothalamus Strong Regionally restricted euxassay_000502_10
TS23: medulla oblongata Strong Regionally restricted euxassay_000502_10
TS23: medulla oblongata basal plate Strong Regionally restricted euxassay_000502_10
TS23: cerebellum Strong Regionally restricted euxassay_000502_10
TS23: metencephalon rest of alar plate Strong Regionally restricted euxassay_000502_10
TS23: pons Strong Regionally restricted euxassay_000502_10
Specimen euxassay_000502_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons Strong Uniform euxassay_000502_11
TS23: cerebellum Strong Uniform euxassay_000502_11
TS23: epithalamus Strong Uniform euxassay_000502_11
TS23: hypothalamus Strong Uniform euxassay_000502_11
TS23: thalamus Strong Uniform euxassay_000502_11
TS23: corpus striatum Strong Uniform euxassay_000502_11
TS23: dorsal root ganglion Strong Uniform euxassay_000502_11
TS23: midbrain mantle layer Strong Uniform euxassay_000502_11
TS23: midbrain marginal layer Strong Uniform euxassay_000502_11
Specimen euxassay_000502_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon sulcus limitans Strong Regionally restricted euxassay_000502_12
TS23: pons Strong Regionally restricted euxassay_000502_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_000502_12
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_000502_12
TS23: corpus striatum Strong Regionally restricted euxassay_000502_12
TS23: hypothalamus Strong Regionally restricted euxassay_000502_12
TS23: thalamus Strong Regionally restricted euxassay_000502_12
TS23: midbrain tegmentum Strong Regionally restricted euxassay_000502_12
TS23: midbrain marginal layer Strong Regionally restricted euxassay_000502_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_000502_12
TS23: dorsal root ganglion Moderate Uniform euxassay_000502_12
Specimen euxassay_000502_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_000502_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000502_13
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000502_13
TS23: cerebellum Moderate Regionally restricted euxassay_000502_13
TS23: dorsal root ganglion Strong Uniform euxassay_000502_13
Specimen euxassay_000502_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Moderate Regionally restricted euxassay_000502_14
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000502_14
TS23: corpus striatum Moderate Regionally restricted euxassay_000502_14
TS23: hindbrain Moderate Regionally restricted euxassay_000502_14
Specimen euxassay_000502_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Moderate Regionally restricted euxassay_000502_15
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000502_15
Specimen euxassay_000502_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000502_16
TS23: telencephalon Moderate Regionally restricted euxassay_000502_16
TS23: basal ganglia Present euxassay_000502_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000502_16
Specimen euxassay_000502_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon Moderate Regionally restricted euxassay_000502_17
TS23: basal ganglia Present euxassay_000502_17
Specimen euxassay_000502_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon Moderate Regionally restricted euxassay_000502_18
TS23: basal ganglia Present euxassay_000502_18
TS23: trigeminal ganglion Moderate Uniform euxassay_000502_18
Specimen euxassay_000502_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon Moderate Uniform euxassay_000502_19
TS23: basal ganglia Present euxassay_000502_19
TS23: neural retina Strong Regionally restricted euxassay_000502_19
Specimen euxassay_000502_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_000502_20
Specimen euxassay_000502_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_000502_22
TS23: telencephalon Weak Regionally restricted euxassay_000502_22
TS23: basal ganglia Present euxassay_000502_22
Specimen euxassay_000502_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Weak Regionally restricted euxassay_000502_23
TS23: trigeminal ganglion Weak Uniform euxassay_000502_23
Specimen euxassay_000502_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: spinal cord mantle layer Moderate Graded euxassay_000502_24
TS23: basal columns Moderate Graded euxassay_000502_24
TS23: midbrain Moderate Regionally restricted euxassay_000502_24
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_000502_24
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000502_24
TS23: telencephalon Moderate Regionally restricted euxassay_000502_24
TS23: telencephalon septum Present euxassay_000502_24
TS23: thalamus Moderate Regionally restricted euxassay_000502_24
TS23: hypothalamus Moderate Regionally restricted euxassay_000502_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory