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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824682
Gene symbol: Rflna
Gene name: refilin A
Probe: MGC clone 59527
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004115_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Moderate Regionally restricted euxassay_004115_01
TS23: rib Moderate Regionally restricted euxassay_004115_01
TS23: radius Moderate Regionally restricted euxassay_004115_01
TS23: ulna Moderate Regionally restricted euxassay_004115_01
Specimen euxassay_004115_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_02
TS23: otic capsule Strong Regionally restricted euxassay_004115_02
TS23: hand Moderate Regionally restricted euxassay_004115_02
TS23: femur Moderate Regionally restricted euxassay_004115_02
TS23: fibula Moderate Regionally restricted euxassay_004115_02
TS23: tibia Moderate Regionally restricted euxassay_004115_02
Specimen euxassay_004115_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_03
TS23: otic capsule Strong Regionally restricted euxassay_004115_03
TS23: rib Moderate Regionally restricted euxassay_004115_03
TS23: hand Moderate Regionally restricted euxassay_004115_03
TS23: humerus Moderate Regionally restricted euxassay_004115_03
TS23: scapula Moderate Regionally restricted euxassay_004115_03
TS23: femur Moderate Regionally restricted euxassay_004115_03
TS23: fibula Moderate Regionally restricted euxassay_004115_03
TS23: tibia Moderate Regionally restricted euxassay_004115_03
Specimen euxassay_004115_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_04
TS23: otic capsule Strong Regionally restricted euxassay_004115_04
TS23: rib Moderate Regionally restricted euxassay_004115_04
TS23: humerus Moderate Regionally restricted euxassay_004115_04
TS23: hand Moderate Regionally restricted euxassay_004115_04
TS23: scapula Moderate Regionally restricted euxassay_004115_04
TS23: femur Weak Regionally restricted euxassay_004115_04
TS23: foot Moderate Regionally restricted euxassay_004115_04
Specimen euxassay_004115_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_05
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_05
TS23: otic capsule Strong Regionally restricted euxassay_004115_05
TS23: rib Moderate Regionally restricted euxassay_004115_05
TS23: hand Moderate Regionally restricted euxassay_004115_05
TS23: foot Moderate Regionally restricted euxassay_004115_05
TS23: femur Weak Regionally restricted euxassay_004115_05
Specimen euxassay_004115_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_06
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_004115_06
TS23: otic capsule Strong Regionally restricted euxassay_004115_06
TS23: rib Moderate Regionally restricted euxassay_004115_06
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_06
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_06
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_06
TS23: hand Strong Regionally restricted euxassay_004115_06
TS23: foot Moderate Regionally restricted euxassay_004115_06
TS23: femur Weak Regionally restricted euxassay_004115_06
Specimen euxassay_004115_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_07
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_07
TS23: otic capsule Strong Regionally restricted euxassay_004115_07
TS23: rib Moderate Regionally restricted euxassay_004115_07
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_07
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_07
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_07
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_07
TS23: hand Strong Regionally restricted euxassay_004115_07
TS23: femur Weak Regionally restricted euxassay_004115_07
TS23: foot Moderate Regionally restricted euxassay_004115_07
Specimen euxassay_004115_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_08
TS23: otic capsule Strong Regionally restricted euxassay_004115_08
TS23: palatal shelf Moderate Regionally restricted euxassay_004115_08
TS23: rib Moderate Regionally restricted euxassay_004115_08
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_08
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_08
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_08
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_08
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_08
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_004115_08
TS23: foot Moderate Regionally restricted euxassay_004115_08
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_08
Specimen euxassay_004115_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_09
TS23: nasal septum Strong Regionally restricted euxassay_004115_09
TS23: palatal shelf Moderate Regionally restricted euxassay_004115_09
TS23: rib Moderate Regionally restricted euxassay_004115_09
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_09
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_09
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_09
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_09
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_09
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_004115_09
TS23: foot Moderate Regionally restricted euxassay_004115_09
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_09
Specimen euxassay_004115_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Moderate Regionally restricted euxassay_004115_10
TS23: palatal shelf Moderate Regionally restricted euxassay_004115_10
TS23: rib Moderate Regionally restricted euxassay_004115_10
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_10
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_10
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_10
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_10
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_10
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_10
Specimen euxassay_004115_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Strong Regionally restricted euxassay_004115_11
TS23: palatal shelf Strong Regionally restricted euxassay_004115_11
TS23: sternum Moderate Regionally restricted euxassay_004115_11
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_11
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_11
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_11
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_11
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_11
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_11
TS23: trachea cartilaginous ring Weak Regionally restricted euxassay_004115_11
Specimen euxassay_004115_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Strong Regionally restricted euxassay_004115_12
TS23: palatal shelf Strong Regionally restricted euxassay_004115_12
TS23: rib Moderate Regionally restricted euxassay_004115_12
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_12
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_12
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_12
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_12
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_004115_12
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_12
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_12
Specimen euxassay_004115_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Strong Regionally restricted euxassay_004115_13
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_13
TS23: rib Moderate Regionally restricted euxassay_004115_13
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_004115_13
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_13
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_13
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_13
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_13
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_13
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_13
Specimen euxassay_004115_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_14
TS23: otic capsule Strong Regionally restricted euxassay_004115_14
TS23: rib Moderate Regionally restricted euxassay_004115_14
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_14
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_14
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_004115_14
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_14
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_004115_14
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_14
TS23: thyroid cartilage Weak Regionally restricted euxassay_004115_14
Specimen euxassay_004115_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_15
TS23: otic capsule Strong Regionally restricted euxassay_004115_15
TS23: palatal shelf Strong Regionally restricted euxassay_004115_15
TS23: rib Moderate Regionally restricted euxassay_004115_15
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_004115_15
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_004115_15
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_004115_15
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_004115_15
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_004115_15
TS23: femur Moderate Regionally restricted euxassay_004115_15
Specimen euxassay_004115_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_16
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_16
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_16
TS23: otic capsule Strong Regionally restricted euxassay_004115_16
TS23: palatal shelf Strong Regionally restricted euxassay_004115_16
TS23: rib Moderate Regionally restricted euxassay_004115_16
TS23: femur Moderate Regionally restricted euxassay_004115_16
Specimen euxassay_004115_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_17
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_17
TS23: otic capsule Strong Regionally restricted euxassay_004115_17
TS23: rib Moderate Regionally restricted euxassay_004115_17
TS23: femur Weak Regionally restricted euxassay_004115_17
Specimen euxassay_004115_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_004115_18
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_004115_18
TS23: turbinate bone primordium Strong Regionally restricted euxassay_004115_18
TS23: otic capsule Strong Regionally restricted euxassay_004115_18
TS23: rib Moderate Regionally restricted euxassay_004115_18
TS23: femur Weak Regionally restricted euxassay_004115_18
Specimen euxassay_004115_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: otic capsule Strong Regionally restricted euxassay_004115_19
TS23: rib Weak Regionally restricted euxassay_004115_19
TS23: femur Weak Regionally restricted euxassay_004115_19
Specimen euxassay_004115_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Weak Regionally restricted euxassay_004115_20
Specimen euxassay_004115_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Moderate Regionally restricted euxassay_004115_21
TS23: rib Moderate Regionally restricted euxassay_004115_21
TS23: hand Moderate Regionally restricted euxassay_004115_21
TS23: foot Moderate Regionally restricted euxassay_004115_21
TS23: femur Moderate Regionally restricted euxassay_004115_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory