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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824678
Gene symbol: Fabp7
Gene name: fatty acid binding protein 7, brain
Probe: IMAGE clone 1498784
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000474_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000474_01
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_01
TS23: pons ventricular layer Moderate Uniform euxassay_000474_01
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_01
TS23: cerebellum intraventricular portion ventricular layer Moderate Uniform euxassay_000474_01
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000474_01
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000474_01
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_01
TS23: hypothalamus mantle layer Moderate Spotted euxassay_000474_01
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_01
Specimen euxassay_000474_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_02
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000474_02
TS23: pons ventricular layer Moderate Uniform euxassay_000474_02
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_02
TS23: cerebellum intraventricular portion ventricular layer Moderate Uniform euxassay_000474_02
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_02
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_02
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_000474_02
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_000474_02
TS23: hypothalamus mantle layer Moderate Spotted euxassay_000474_02
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_02
TS23: pons mantle layer Moderate Spotted euxassay_000474_02
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_02
TS23: olfactory epithelium Moderate Uniform euxassay_000474_02
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000474_02
Specimen euxassay_000474_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_03
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_03
TS23: trigeminal ganglion Weak Regionally restricted euxassay_000474_03
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_03
Specimen euxassay_000474_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_04
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_04
Specimen euxassay_000474_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_05
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_05
Specimen euxassay_000474_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_06
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_06
Specimen euxassay_000474_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_07
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_000474_07
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_07
Specimen euxassay_000474_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_08
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000474_08
TS23: facial ganglion Moderate Regionally restricted euxassay_000474_08
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_08
Specimen euxassay_000474_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_09
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_09
TS23: trigeminal ganglion Weak Regionally restricted euxassay_000474_09
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_09
Specimen euxassay_000474_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_10
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_10
TS23: trigeminal ganglion Weak Regionally restricted euxassay_000474_10
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_000474_10
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_10
Specimen euxassay_000474_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_11
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_11
TS23: cerebellum intraventricular portion ventricular layer Moderate Uniform euxassay_000474_11
TS23: pons ventricular layer Moderate Uniform euxassay_000474_11
TS23: trigeminal ganglion Weak Regionally restricted euxassay_000474_11
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000474_11
TS23: facial ganglion Moderate Regionally restricted euxassay_000474_11
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_11
TS23: pons mantle layer Moderate Spotted euxassay_000474_11
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_11
Specimen euxassay_000474_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000474_12
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000474_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_12
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_12
TS23: cerebellum intraventricular portion ventricular layer Moderate Uniform euxassay_000474_12
TS23: pons ventricular layer Moderate Uniform euxassay_000474_12
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_12
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_12
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_000474_12
TS23: hypothalamus mantle layer Moderate Spotted euxassay_000474_12
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_12
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_12
TS23: pons mantle layer Moderate Spotted euxassay_000474_12
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_12
Specimen euxassay_000474_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000474_13
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000474_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_13
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_13
TS23: cerebellum intraventricular portion ventricular layer Moderate Uniform euxassay_000474_13
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_13
TS23: pons ventricular layer Moderate Uniform euxassay_000474_13
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_13
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_000474_13
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_000474_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_000474_13
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_13
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_13
TS23: pons mantle layer Moderate Spotted euxassay_000474_13
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_13
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000474_13
Specimen euxassay_000474_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000474_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_14
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_14
TS23: pons ventricular layer Moderate Uniform euxassay_000474_14
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_14
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_000474_14
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_000474_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_000474_14
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_14
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_14
TS23: pons mantle layer Moderate Spotted euxassay_000474_14
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_14
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000474_14
Specimen euxassay_000474_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000474_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_15
TS23: pons ventricular layer Moderate Uniform euxassay_000474_15
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_15
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_15
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_000474_15
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_000474_15
TS23: ventral grey horn Weak Regionally restricted euxassay_000474_15
TS23: pons mantle layer Moderate Spotted euxassay_000474_15
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_15
Specimen euxassay_000474_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_16
TS23: pons ventricular layer Moderate Uniform euxassay_000474_16
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_16
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_16
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_000474_16
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_000474_16
TS23: ventral grey horn Weak Regionally restricted euxassay_000474_16
TS23: pons mantle layer Moderate Spotted euxassay_000474_16
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_16
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000474_16
Specimen euxassay_000474_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000474_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_17
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000474_17
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_17
TS23: pons ventricular layer Moderate Uniform euxassay_000474_17
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_17
TS23: hypothalamus mantle layer Moderate Spotted euxassay_000474_17
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_17
TS23: pons mantle layer Moderate Spotted euxassay_000474_17
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_17
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_17
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000474_17
Specimen euxassay_000474_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000474_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_18
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_000474_18
TS23: pons ventricular layer Moderate Uniform euxassay_000474_18
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000474_18
TS23: hypothalamus mantle layer Moderate Spotted euxassay_000474_18
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_18
TS23: pons mantle layer Moderate Spotted euxassay_000474_18
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_18
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_18
Specimen euxassay_000474_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000474_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_19
TS23: cerebellum intraventricular portion ventricular layer Moderate Uniform euxassay_000474_19
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_19
TS23: pons ventricular layer Moderate Uniform euxassay_000474_19
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000474_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000474_19
TS23: hypothalamus mantle layer Moderate Spotted euxassay_000474_19
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_19
TS23: pons mantle layer Moderate Spotted euxassay_000474_19
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_19
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_19
Specimen euxassay_000474_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000474_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_20
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_20
TS23: rest of cerebellum Moderate Uniform euxassay_000474_20
TS23: pons ventricular layer Moderate Uniform euxassay_000474_20
TS23: midbrain ventricular layer Moderate Uniform euxassay_000474_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000474_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000474_20
TS23: facial ganglion Moderate Regionally restricted euxassay_000474_20
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_20
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_000474_20
TS23: pons mantle layer Moderate Spotted euxassay_000474_20
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_000474_20
TS23: midbrain mantle layer Moderate Spotted euxassay_000474_20
Specimen euxassay_000474_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000474_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_21
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_21
TS23: pons ventricular layer Moderate Uniform euxassay_000474_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_000474_21
TS23: facial ganglion Weak Regionally restricted euxassay_000474_21
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_21
TS23: pons mantle layer Moderate Spotted euxassay_000474_21
Specimen euxassay_000474_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000474_22
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_000474_22
TS23: facial ganglion Moderate Regionally restricted euxassay_000474_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000474_22
TS23: telencephalon mantle layer Moderate Spotted euxassay_000474_22
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory