About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824584
Gene symbol: Epha6
Gene name: Eph receptor A6
Probe: T36346
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008061_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008061_03
TS23: trigeminal ganglion Weak Single cells euxassay_008061_03
TS23: ventral grey horn Weak Single cells euxassay_008061_03
TS23: forebrain Weak Single cells euxassay_008061_03
TS23: hindbrain Weak Single cells euxassay_008061_03
TS23: midbrain Weak Single cells euxassay_008061_03
Specimen euxassay_008061_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008061_04
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_04
TS23: ventral grey horn Weak Single cells euxassay_008061_04
TS23: midbrain Weak Single cells euxassay_008061_04
TS23: hindbrain Weak Single cells euxassay_008061_04
TS23: forebrain Weak Single cells euxassay_008061_04
Specimen euxassay_008061_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_008061_05
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_05
TS23: ventral grey horn Weak Single cells euxassay_008061_05
TS23: midbrain Weak Single cells euxassay_008061_05
TS23: hindbrain Weak Single cells euxassay_008061_05
TS23: forebrain Weak Single cells euxassay_008061_05
Specimen euxassay_008061_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_06
TS23: ventral grey horn Moderate Single cells euxassay_008061_06
TS23: midbrain Weak Single cells euxassay_008061_06
TS23: hindbrain Weak Single cells euxassay_008061_06
TS23: forebrain Weak Single cells euxassay_008061_06
Specimen euxassay_008061_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_07
TS23: ventral grey horn Moderate Single cells euxassay_008061_07
TS23: midbrain Weak Single cells euxassay_008061_07
TS23: hindbrain Weak Single cells euxassay_008061_07
TS23: forebrain Weak Single cells euxassay_008061_07
Specimen euxassay_008061_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_08
TS23: ventral grey horn Moderate Single cells euxassay_008061_08
TS23: midbrain Weak Single cells euxassay_008061_08
TS23: hindbrain Weak Single cells euxassay_008061_08
TS23: forebrain Weak Single cells euxassay_008061_08
Specimen euxassay_008061_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Single cells euxassay_008061_09
TS23: midbrain Weak Single cells euxassay_008061_09
TS23: hindbrain Weak Single cells euxassay_008061_09
TS23: forebrain Weak Single cells euxassay_008061_09
Specimen euxassay_008061_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Single cells euxassay_008061_10
TS23: midbrain Weak Single cells euxassay_008061_10
TS23: forebrain Weak Single cells euxassay_008061_10
TS23: hindbrain Weak Single cells euxassay_008061_10
Specimen euxassay_008061_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Single cells euxassay_008061_11
TS23: midbrain Weak Single cells euxassay_008061_11
TS23: hindbrain Weak Single cells euxassay_008061_11
TS23: forebrain Weak Single cells euxassay_008061_11
Specimen euxassay_008061_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Weak Single cells euxassay_008061_12
TS23: hindbrain Weak Single cells euxassay_008061_12
TS23: forebrain Weak Single cells euxassay_008061_12
Specimen euxassay_008061_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Weak Single cells euxassay_008061_13
TS23: hindbrain Weak Single cells euxassay_008061_13
TS23: forebrain Weak Single cells euxassay_008061_13
Specimen euxassay_008061_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Weak Single cells euxassay_008061_14
TS23: hindbrain Weak Single cells euxassay_008061_14
TS23: forebrain Weak Single cells euxassay_008061_14
Specimen euxassay_008061_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_15
TS23: midbrain Weak Single cells euxassay_008061_15
TS23: hindbrain Weak Single cells euxassay_008061_15
TS23: forebrain Weak Single cells euxassay_008061_15
Specimen euxassay_008061_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_16
Specimen euxassay_008061_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_17
Specimen euxassay_008061_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_18
TS23: forebrain Weak Single cells euxassay_008061_18
Specimen euxassay_008061_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_19
TS23: forebrain Weak Single cells euxassay_008061_19
Specimen euxassay_008061_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_008061_20
TS23: forebrain Weak Single cells euxassay_008061_20
Specimen euxassay_008061_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forebrain Weak Single cells euxassay_008061_21
Specimen euxassay_008061_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_008061_22
TS23: forebrain Weak Single cells euxassay_008061_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory