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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824548
Gene symbol: Emx2
Gene name: empty spiracles homeobox 2
Probe: T55041
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019479_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_02
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_019479_02
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_019479_02
TS23: eyelid Weak Regionally restricted euxassay_019479_02
Specimen euxassay_019479_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_03
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_019479_03
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_019479_03
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_019479_03
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_019479_03
TS23: eyelid Moderate Regionally restricted euxassay_019479_03
Specimen euxassay_019479_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_04
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_019479_04
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_019479_04
TS23: eyelid Moderate Regionally restricted euxassay_019479_04
Specimen euxassay_019479_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_05
TS23: amygdala Present euxassay_019479_05
TS23: paramesonephric duct of female Strong Regionally restricted euxassay_019479_05
Specimen euxassay_019479_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_06
TS23: amygdala Present euxassay_019479_06
TS23: paramesonephric duct of female Strong Regionally restricted euxassay_019479_06
TS23: vibrissa Weak Regionally restricted euxassay_019479_06
Specimen euxassay_019479_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_07
TS23: amygdala Present euxassay_019479_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_07
TS23: saccule Strong Regionally restricted euxassay_019479_07
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_07
TS23: vibrissa Weak Regionally restricted euxassay_019479_07
Specimen euxassay_019479_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019479_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019479_09
TS23: saccule Moderate Regionally restricted euxassay_019479_09
TS23: paramesonephric duct of female Weak Regionally restricted euxassay_019479_09
TS23: vibrissa Weak Regionally restricted euxassay_019479_09
Specimen euxassay_019479_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_10
TS23: metanephros Strong Regionally restricted euxassay_019479_10
TS23: lower lip Weak Regionally restricted euxassay_019479_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_10
TS23: saccule Moderate Regionally restricted euxassay_019479_10
TS23: paramesonephric duct of female Weak Regionally restricted euxassay_019479_10
TS23: vibrissa Weak Regionally restricted euxassay_019479_10
Specimen euxassay_019479_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_11
TS23: metanephros Strong Regionally restricted euxassay_019479_11
TS23: lower lip Weak Regionally restricted euxassay_019479_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019479_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_11
TS23: saccule Moderate Regionally restricted euxassay_019479_11
TS23: paramesonephric duct of female Weak Regionally restricted euxassay_019479_11
TS23: vibrissa Weak Regionally restricted euxassay_019479_11
Specimen euxassay_019479_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_12
TS23: metanephros Moderate Regionally restricted euxassay_019479_12
TS23: lower lip Weak Regionally restricted euxassay_019479_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019479_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_12
TS23: paramesonephric duct of female Weak Regionally restricted euxassay_019479_12
Specimen euxassay_019479_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_13
TS23: lower lip Moderate Regionally restricted euxassay_019479_13
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019479_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019479_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_13
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_13
Specimen euxassay_019479_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_14
TS23: vomeronasal organ Strong Regionally restricted euxassay_019479_14
TS23: lower lip Moderate Regionally restricted euxassay_019479_14
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_14
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019479_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_14
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_14
Specimen euxassay_019479_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019479_15
TS23: lower lip Moderate Regionally restricted euxassay_019479_15
TS23: upper lip Moderate Regionally restricted euxassay_019479_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019479_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_15
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_15
Specimen euxassay_019479_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019479_16
TS23: upper lip Moderate Regionally restricted euxassay_019479_16
TS23: lower lip Moderate Regionally restricted euxassay_019479_16
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019479_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019479_16
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_019479_16
TS23: paramesonephric duct of female Weak Regionally restricted euxassay_019479_16
Specimen euxassay_019479_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_17
TS23: vomeronasal organ Strong Regionally restricted euxassay_019479_17
TS23: lower lip Moderate Regionally restricted euxassay_019479_17
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019479_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_17
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_17
Specimen euxassay_019479_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_18
TS23: metanephros Strong Regionally restricted euxassay_019479_18
TS23: upper lip Moderate Regionally restricted euxassay_019479_18
TS23: lower lip Moderate Regionally restricted euxassay_019479_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_18
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_019479_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019479_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019479_18
Specimen euxassay_019479_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_19
TS23: metanephros Strong Regionally restricted euxassay_019479_19
TS23: upper lip Moderate Regionally restricted euxassay_019479_19
TS23: lower lip Moderate Regionally restricted euxassay_019479_19
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_19
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019479_19
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019479_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019479_19
TS23: saccule Moderate Regionally restricted euxassay_019479_19
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_19
Specimen euxassay_019479_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_20
TS23: metanephros Strong Regionally restricted euxassay_019479_20
TS23: upper lip Moderate Regionally restricted euxassay_019479_20
TS23: lower lip Moderate Regionally restricted euxassay_019479_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_20
TS23: amygdala Present euxassay_019479_20
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019479_20
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019479_20
TS23: saccule Weak Regionally restricted euxassay_019479_20
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_20
Specimen euxassay_019479_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019479_21
TS23: metanephros Strong Regionally restricted euxassay_019479_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_21
TS23: amygdala Present euxassay_019479_21
TS23: saccule Weak Regionally restricted euxassay_019479_21
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_21
Specimen euxassay_019479_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019479_22
TS23: lower lip Moderate Regionally restricted euxassay_019479_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019479_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_22
TS23: amygdala Present euxassay_019479_22
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_019479_22
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_019479_22
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019479_22
TS23: saccule Moderate Regionally restricted euxassay_019479_22
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_22
Specimen euxassay_019479_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lower lip Weak Regionally restricted euxassay_019479_23
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019479_23
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_019479_23
TS23: amygdala Present euxassay_019479_23
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_019479_23
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019479_23
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_019479_23
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_019479_23
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_019479_23
TS23: saccule Moderate Regionally restricted euxassay_019479_23
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_019479_23
Specimen euxassay_019479_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lower lip Weak Regionally restricted euxassay_019479_24
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019479_24
TS23: amygdala Present euxassay_019479_24
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_019479_24
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_019479_24
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_019479_24
TS23: vibrissa Weak Regionally restricted euxassay_019479_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory