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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824535
Gene symbol: Emb
Gene name: embigin
Probe: MGC clone 21425
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003052_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003052_01
TS23: liver lobe Strong Single cells euxassay_003052_01
Specimen euxassay_003052_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003052_02
TS23: liver lobe Strong Single cells euxassay_003052_02
Specimen euxassay_003052_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003052_03
TS23: liver lobe Strong Single cells euxassay_003052_03
TS23: neural retina Moderate Uniform euxassay_003052_03
Specimen euxassay_003052_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003052_04
TS23: liver lobe Strong Single cells euxassay_003052_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003052_04
TS23: neural retina Moderate Uniform euxassay_003052_04
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_04
Specimen euxassay_003052_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_05
TS23: facial ganglion Strong Regionally restricted euxassay_003052_05
TS23: neural retina Moderate Uniform euxassay_003052_05
TS23: stomach Moderate Regionally restricted euxassay_003052_05
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_05
Specimen euxassay_003052_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_06
TS23: facial ganglion Strong Regionally restricted euxassay_003052_06
TS23: lower jaw molar Strong Regionally restricted euxassay_003052_06
TS23: stomach Moderate Regionally restricted euxassay_003052_06
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_06
Specimen euxassay_003052_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_07
TS23: facial ganglion Moderate Regionally restricted euxassay_003052_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_003052_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_003052_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_07
TS23: stomach Moderate Regionally restricted euxassay_003052_07
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_07
Specimen euxassay_003052_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003052_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_003052_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_003052_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_08
TS23: renal calyx Strong Regionally restricted euxassay_003052_08
TS23: stomach Moderate Regionally restricted euxassay_003052_08
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_08
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_08
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_003052_08 trigeminal motor nucleus
Specimen euxassay_003052_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_09
TS23: vagus ganglion Strong Regionally restricted euxassay_003052_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_09
TS23: renal calyx Strong Regionally restricted euxassay_003052_09
TS23: adrenal gland Strong Uniform euxassay_003052_09
TS23: stomach Strong Regionally restricted euxassay_003052_09
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_09
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_09
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003052_09 facial motor nucleus
Specimen euxassay_003052_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_10
TS23: pancreas Strong Regionally restricted euxassay_003052_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_003052_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_10
TS23: renal calyx Strong Regionally restricted euxassay_003052_10
TS23: adrenal gland Strong Uniform euxassay_003052_10
TS23: stomach Strong Regionally restricted euxassay_003052_10
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_10
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_10
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003052_10 facial motor nucleus
TS23: cervical ganglion Moderate Regionally restricted euxassay_003052_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003052_10
Specimen euxassay_003052_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_11
TS23: pituitary gland Strong Regionally restricted euxassay_003052_11
TS23: thymus primordium Moderate Uniform euxassay_003052_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_003052_11
TS23: pancreas Strong Regionally restricted euxassay_003052_11
TS23: ventral grey horn Weak Regionally restricted euxassay_003052_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_11
TS23: naris Strong Regionally restricted euxassay_003052_11
TS23: renal calyx Strong Regionally restricted euxassay_003052_11
TS23: adrenal gland Strong Uniform euxassay_003052_11
TS23: stomach Strong Regionally restricted euxassay_003052_11
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_11
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_11
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003052_11 facial motor nucleus
Specimen euxassay_003052_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_12
TS23: pituitary gland Strong Regionally restricted euxassay_003052_12
TS23: thymus primordium Moderate Uniform euxassay_003052_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_003052_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_003052_12
TS23: pancreas Strong Regionally restricted euxassay_003052_12
TS23: ventral grey horn Weak Regionally restricted euxassay_003052_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_12
TS23: naris Strong Regionally restricted euxassay_003052_12
TS23: renal calyx Strong Regionally restricted euxassay_003052_12
TS23: stomach Strong Regionally restricted euxassay_003052_12
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_12
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_12
Specimen euxassay_003052_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_13
TS23: pituitary gland Strong Regionally restricted euxassay_003052_13
TS23: thymus primordium Moderate Uniform euxassay_003052_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_003052_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_003052_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003052_13
TS23: pancreas Strong Regionally restricted euxassay_003052_13
TS23: ventral grey horn Weak Regionally restricted euxassay_003052_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_13
TS23: naris Strong Regionally restricted euxassay_003052_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_13
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_13
TS23: trachea Strong Regionally restricted euxassay_003052_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003052_13
Specimen euxassay_003052_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_14
TS23: pituitary gland Strong Regionally restricted euxassay_003052_14
TS23: thymus primordium Moderate Uniform euxassay_003052_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003052_14
TS23: pancreas Strong Regionally restricted euxassay_003052_14
TS23: ventral grey horn Weak Regionally restricted euxassay_003052_14
TS23: naris Strong Regionally restricted euxassay_003052_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_14
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_14
TS23: trachea Strong Regionally restricted euxassay_003052_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003052_14
Specimen euxassay_003052_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_15
TS23: pituitary gland Strong Regionally restricted euxassay_003052_15
TS23: thymus primordium Moderate Uniform euxassay_003052_15
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_003052_15
TS23: ventral grey horn Weak Regionally restricted euxassay_003052_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003052_15
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_15
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_15
TS23: trachea Strong Regionally restricted euxassay_003052_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003052_15
Specimen euxassay_003052_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_003052_16
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_003052_16
TS23: pancreas Strong Regionally restricted euxassay_003052_16
TS23: ventral grey horn Weak Regionally restricted euxassay_003052_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_16
TS23: naris Strong Regionally restricted euxassay_003052_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_16
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_16
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_16
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003052_16 facial motor nucleus
TS23: cervical ganglion Moderate Regionally restricted euxassay_003052_16
Specimen euxassay_003052_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_003052_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_17
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_003052_17
TS23: pancreas Strong Regionally restricted euxassay_003052_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_003052_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_17
TS23: naris Strong Regionally restricted euxassay_003052_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_17
TS23: renal calyx Strong Regionally restricted euxassay_003052_17
TS23: adrenal gland Strong Uniform euxassay_003052_17
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_17
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_17
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_003052_17 trigeminal motor nucleus
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003052_17 facial motor nucleus
Specimen euxassay_003052_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003052_18
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003052_18
TS23: pancreas Strong Regionally restricted euxassay_003052_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_18
TS23: naris Strong Regionally restricted euxassay_003052_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_18
TS23: renal calyx Strong Regionally restricted euxassay_003052_18
TS23: adrenal gland Strong Uniform euxassay_003052_18
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_18
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_18
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_003052_18 trigeminal motor nucleus
Specimen euxassay_003052_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003052_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003052_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_003052_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_003052_19
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003052_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_003052_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003052_19
TS23: renal pelvis Strong Regionally restricted euxassay_003052_19
TS23: adrenal gland Strong Uniform euxassay_003052_19
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003052_19
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_19
Specimen euxassay_003052_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003052_20
TS23: facial ganglion Moderate Regionally restricted euxassay_003052_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003052_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_003052_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_003052_20
TS23: renal calyx Strong Regionally restricted euxassay_003052_20
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_20
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003052_20
Specimen euxassay_003052_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Single cells euxassay_003052_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003052_21
TS23: facial ganglion Moderate Regionally restricted euxassay_003052_21
TS23: renal calyx Strong Regionally restricted euxassay_003052_21
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_21
Specimen euxassay_003052_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003052_22
TS23: liver lobe Strong Single cells euxassay_003052_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003052_22
TS23: neural retina Moderate Uniform euxassay_003052_22
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003052_22
Specimen euxassay_003052_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003052_23
TS23: liver lobe Strong Single cells euxassay_003052_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003052_23
TS23: neural retina Moderate Uniform euxassay_003052_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory