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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824522
Gene symbol: Elfn1
Gene name: leucine rich repeat and fibronectin type III, extracellular 1
Probe: MGC clone 69764
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007454_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_02
Specimen euxassay_007454_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_03
Specimen euxassay_007454_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_04
Specimen euxassay_007454_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_05
TS23: facial ganglion Moderate Single cells euxassay_007454_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_05
Specimen euxassay_007454_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_06
TS23: facial ganglion Moderate Single cells euxassay_007454_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_06
Specimen euxassay_007454_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_07
Specimen euxassay_007454_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_08
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007454_08
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_08
Specimen euxassay_007454_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_09
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007454_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007454_09
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_09
Specimen euxassay_007454_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007454_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_10
Specimen euxassay_007454_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007454_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_11
TS23: thyroid gland Strong Regionally restricted euxassay_007454_11
Specimen euxassay_007454_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007454_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_12
TS23: thyroid gland Strong Regionally restricted euxassay_007454_12
Specimen euxassay_007454_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007454_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_13
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_13
TS23: thyroid gland Strong Regionally restricted euxassay_007454_13
Specimen euxassay_007454_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_14
Specimen euxassay_007454_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_15
Specimen euxassay_007454_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007454_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_16
TS23: thyroid gland Strong Regionally restricted euxassay_007454_16
Specimen euxassay_007454_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_17
TS23: thyroid gland Strong Regionally restricted euxassay_007454_17
Specimen euxassay_007454_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007454_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_18
Specimen euxassay_007454_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_19
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007454_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007454_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_19
Specimen euxassay_007454_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007454_20
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_20
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007454_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_20
Specimen euxassay_007454_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_21
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007454_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_21
Specimen euxassay_007454_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_22
TS23: facial ganglion Moderate Single cells euxassay_007454_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_22
Specimen euxassay_007454_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_007454_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_23
Specimen euxassay_007454_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007454_24
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007454_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory