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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824487
Gene symbol: Efnb2
Gene name: ephrin B2
Probe: T50379
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018950_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_018950_02
Specimen euxassay_018950_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_03
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_03
TS23: hand mesenchyme Moderate Regionally restricted euxassay_018950_03
Specimen euxassay_018950_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_04
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_04
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_04
TS23: hand mesenchyme Moderate Regionally restricted euxassay_018950_04
Specimen euxassay_018950_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018950_05
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_05
TS23: hand mesenchyme Moderate Regionally restricted euxassay_018950_05
Specimen euxassay_018950_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_06
TS23: vibrissa Weak Regionally restricted euxassay_018950_06
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_06
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_06
TS23: hand mesenchyme Moderate Regionally restricted euxassay_018950_06
Specimen euxassay_018950_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_07
TS23: metanephros Weak Regionally restricted euxassay_018950_07
TS23: vibrissa Weak Regionally restricted euxassay_018950_07
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_07
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_07
Specimen euxassay_018950_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_08
TS23: metanephros Weak Regionally restricted euxassay_018950_08
TS23: vibrissa Weak Regionally restricted euxassay_018950_08
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_08
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018950_08
Specimen euxassay_018950_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_09
TS23: metanephros Moderate Regionally restricted euxassay_018950_09
TS23: vibrissa Weak Regionally restricted euxassay_018950_09
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_09
TS23: pericardium Moderate Regionally restricted euxassay_018950_09
TS23: upper jaw molar Weak Regionally restricted euxassay_018950_09
TS23: lower jaw molar Weak Regionally restricted euxassay_018950_09
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018950_09
Specimen euxassay_018950_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_10
TS23: metanephros Moderate Regionally restricted euxassay_018950_10
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_10
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_10
TS23: pericardium Moderate Regionally restricted euxassay_018950_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018950_10
Specimen euxassay_018950_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_11
TS23: metanephros Moderate Regionally restricted euxassay_018950_11
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_11
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_11
TS23: pericardium Moderate Regionally restricted euxassay_018950_11
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018950_11
Specimen euxassay_018950_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_12
TS23: metanephros Weak Regionally restricted euxassay_018950_12
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_12
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_12
TS23: pericardium Moderate Regionally restricted euxassay_018950_12
Specimen euxassay_018950_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_13
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_13
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_13
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_13
TS23: pericardium Weak Regionally restricted euxassay_018950_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018950_13
Specimen euxassay_018950_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_14
TS23: esophagus Weak Regionally restricted euxassay_018950_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018950_14
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_14
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_14
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_018950_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018950_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018950_14
Specimen euxassay_018950_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_15
TS23: esophagus Weak Regionally restricted euxassay_018950_15
TS23: bladder Weak Regionally restricted euxassay_018950_15
TS23: urethra Weak Regionally restricted euxassay_018950_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_15
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_15
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_018950_15
TS23: upper jaw incisor Weak Regionally restricted euxassay_018950_15
Specimen euxassay_018950_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_16
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018950_16
TS23: bladder Weak Regionally restricted euxassay_018950_16
TS23: urethra Weak Regionally restricted euxassay_018950_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_16
TS23: pericardium Weak Regionally restricted euxassay_018950_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_018950_16
TS23: inferior colliculus Present euxassay_018950_16
Specimen euxassay_018950_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_17
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018950_17
TS23: bladder Weak Regionally restricted euxassay_018950_17
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_17
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_17
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_17
TS23: pericardium Moderate Regionally restricted euxassay_018950_17
Specimen euxassay_018950_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_18
TS23: metanephros Weak Regionally restricted euxassay_018950_18
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018950_18
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_18
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_18
TS23: pericardium Moderate Regionally restricted euxassay_018950_18
TS23: upper jaw incisor Weak Regionally restricted euxassay_018950_18
TS23: lower jaw incisor Weak Regionally restricted euxassay_018950_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018950_18
Specimen euxassay_018950_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_19
TS23: metanephros Moderate Regionally restricted euxassay_018950_19
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018950_19
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_018950_19
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_19
TS23: pericardium Moderate Regionally restricted euxassay_018950_19
TS23: upper jaw incisor Weak Regionally restricted euxassay_018950_19
TS23: lower jaw incisor Weak Regionally restricted euxassay_018950_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018950_19
Specimen euxassay_018950_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_20
TS23: metanephros Weak Regionally restricted euxassay_018950_20
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_20
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018950_20
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_018950_20
Specimen euxassay_018950_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_21
TS23: metanephros Moderate Regionally restricted euxassay_018950_21
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_21
Specimen euxassay_018950_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_22
TS23: metanephros Weak Regionally restricted euxassay_018950_22
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_22
Specimen euxassay_018950_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_23
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_23
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_23
Specimen euxassay_018950_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_018950_24
TS23: vibrissa Weak Regionally restricted euxassay_018950_24
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_018950_24
TS23: foot mesenchyme Moderate Regionally restricted euxassay_018950_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory