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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824425
Gene symbol: Col6a4
Gene name: collagen, type VI, alpha 4
Probe: T38367
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010834_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_010834_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_03
Specimen euxassay_010834_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_010834_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_04
Specimen euxassay_010834_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_010834_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_05
Specimen euxassay_010834_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_010834_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_06
Specimen euxassay_010834_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_010834_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_07
Specimen euxassay_010834_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_010834_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_08
Specimen euxassay_010834_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010834_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_09
Specimen euxassay_010834_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010834_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_10
TS23: esophagus Strong Regionally restricted euxassay_010834_10
Specimen euxassay_010834_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010834_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_11
TS23: midgut Strong Regionally restricted euxassay_010834_11 smooth muscle
Specimen euxassay_010834_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_12
Specimen euxassay_010834_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_13
Specimen euxassay_010834_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_14 smooth muscle
TS23: hindgut Strong Regionally restricted euxassay_010834_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_14
Specimen euxassay_010834_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_15 smooth muscle
TS23: stomach Strong Regionally restricted euxassay_010834_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_15
Specimen euxassay_010834_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_16
Specimen euxassay_010834_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_17
Specimen euxassay_010834_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_010834_18 smooth muscle
TS23: smooth muscle tissue Present euxassay_010834_18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory