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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824260
Gene symbol: Dcx
Gene name: doublecortin
Probe: EH3164 probe 3113
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009545_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_01
TS23: neural retina Strong Regionally restricted euxassay_009545_01
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_01
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_009545_01
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_01
TS23: hand Weak Regionally restricted euxassay_009545_01
TS23: forearm rest of mesenchyme Weak Regionally restricted euxassay_009545_01
TS23: diaphragm Weak Regionally restricted euxassay_009545_01
Specimen euxassay_009545_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_02
TS23: neural retina Strong Regionally restricted euxassay_009545_02
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_02
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_009545_02
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_02
TS23: hand Weak Regionally restricted euxassay_009545_02
TS23: diaphragm Weak Regionally restricted euxassay_009545_02
Specimen euxassay_009545_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_03
TS23: neural retina Strong Regionally restricted euxassay_009545_03
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_03
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_009545_03
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_03
TS23: hand Weak Regionally restricted euxassay_009545_03
TS23: diaphragm Weak Regionally restricted euxassay_009545_03
Specimen euxassay_009545_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_04
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_04
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_009545_04
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_04
TS23: hand Weak Regionally restricted euxassay_009545_04
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_04
Specimen euxassay_009545_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_05
TS23: facial ganglion Strong Regionally restricted euxassay_009545_05
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_05
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_009545_05
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_05
TS23: foot Weak Regionally restricted euxassay_009545_05
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_05
TS23: hand Weak Regionally restricted euxassay_009545_05
TS23: diaphragm Weak Regionally restricted euxassay_009545_05
TS23: stomach Moderate Spotted euxassay_009545_05
Specimen euxassay_009545_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_06
TS23: facial ganglion Strong Regionally restricted euxassay_009545_06
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_06
TS23: foot Weak Regionally restricted euxassay_009545_06
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_06
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_06
TS23: diaphragm Weak Regionally restricted euxassay_009545_06
TS23: stomach Moderate Spotted euxassay_009545_06
Specimen euxassay_009545_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_07
TS23: facial ganglion Strong Regionally restricted euxassay_009545_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009545_07
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_07
TS23: foot Weak Regionally restricted euxassay_009545_07
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_07
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_07
TS23: diaphragm Weak Regionally restricted euxassay_009545_07
TS23: stomach Weak Spotted euxassay_009545_07
Specimen euxassay_009545_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_08
TS23: facial ganglion Strong Regionally restricted euxassay_009545_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009545_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009545_08
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_08
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_08
TS23: foot Weak Regionally restricted euxassay_009545_08
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_08
TS23: stomach Weak Spotted euxassay_009545_08
TS23: renal capsule Moderate Spotted euxassay_009545_08
Specimen euxassay_009545_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009545_09
TS23: vagus ganglion Strong Regionally restricted euxassay_009545_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_09
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_09
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_09
TS23: diaphragm Weak Regionally restricted euxassay_009545_09
TS23: stomach Moderate Spotted euxassay_009545_09
TS23: renal capsule Moderate Spotted euxassay_009545_09
Specimen euxassay_009545_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_10
TS23: trigeminal nerve Strong Regionally restricted euxassay_009545_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_10
TS23: cervical ganglion Strong Regionally restricted euxassay_009545_10
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_10
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_10
TS23: diaphragm Weak Regionally restricted euxassay_009545_10
TS23: midgut Moderate Spotted euxassay_009545_10
TS23: renal capsule Weak Regionally restricted euxassay_009545_10
Specimen euxassay_009545_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_11
TS23: spinal cord Strong Regionally restricted euxassay_009545_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_11
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009545_11
TS23: cervical ganglion Moderate Regionally restricted euxassay_009545_11
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_11
TS23: tongue muscle Weak Regionally restricted euxassay_009545_11
TS23: diaphragm Weak Regionally restricted euxassay_009545_11
TS23: midgut Moderate Spotted euxassay_009545_11
TS23: renal capsule Weak Regionally restricted euxassay_009545_11
Specimen euxassay_009545_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_12
TS23: spinal cord Strong Regionally restricted euxassay_009545_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_12
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_12
TS23: tongue muscle Weak Regionally restricted euxassay_009545_12
Specimen euxassay_009545_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_13
TS23: spinal cord Strong Regionally restricted euxassay_009545_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009545_13
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009545_13
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_13
TS23: tongue muscle Moderate Regionally restricted euxassay_009545_13
TS23: midgut Moderate Spotted euxassay_009545_13
Specimen euxassay_009545_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_14
TS23: spinal cord Strong Regionally restricted euxassay_009545_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009545_14
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_14
TS23: tongue muscle Weak Regionally restricted euxassay_009545_14
TS23: midgut Moderate Spotted euxassay_009545_14
Specimen euxassay_009545_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_15
TS23: spinal cord Strong Regionally restricted euxassay_009545_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009545_15
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_15
TS23: tongue muscle Weak Regionally restricted euxassay_009545_15
TS23: midgut Moderate Spotted euxassay_009545_15
Specimen euxassay_009545_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_16
TS23: spinal cord Strong Regionally restricted euxassay_009545_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_16
TS23: thoracic ganglion Weak Regionally restricted euxassay_009545_16
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_16
TS23: midgut Moderate Spotted euxassay_009545_16
Specimen euxassay_009545_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_17
TS23: spinal cord Strong Regionally restricted euxassay_009545_17
TS23: trigeminal nerve Strong Regionally restricted euxassay_009545_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_009545_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009545_17
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_17
TS23: midgut Moderate Spotted euxassay_009545_17
Specimen euxassay_009545_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_18
TS23: spinal cord Strong Regionally restricted euxassay_009545_18
TS23: trigeminal nerve Strong Regionally restricted euxassay_009545_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009545_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_18
TS23: cervical ganglion Strong Regionally restricted euxassay_009545_18
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_18
TS23: midgut Moderate Spotted euxassay_009545_18
Specimen euxassay_009545_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009545_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009545_19
TS23: vagus ganglion Strong Regionally restricted euxassay_009545_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009545_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_009545_19
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_19
TS23: diaphragm Weak Regionally restricted euxassay_009545_19
TS23: renal capsule Weak Regionally restricted euxassay_009545_19
Specimen euxassay_009545_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_20
TS23: facial ganglion Strong Regionally restricted euxassay_009545_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009545_20
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009545_20
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_20
TS23: diaphragm Weak Regionally restricted euxassay_009545_20
TS23: renal capsule Weak Regionally restricted euxassay_009545_20
Specimen euxassay_009545_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_21
TS23: facial ganglion Strong Regionally restricted euxassay_009545_21
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_21
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_21
TS23: diaphragm Weak Regionally restricted euxassay_009545_21
TS23: renal capsule Moderate Regionally restricted euxassay_009545_21
Specimen euxassay_009545_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_22
TS23: facial ganglion Strong Regionally restricted euxassay_009545_22
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_22
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_22
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_22
TS23: diaphragm Weak Regionally restricted euxassay_009545_22
TS23: renal capsule Moderate Regionally restricted euxassay_009545_22
Specimen euxassay_009545_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_23
TS23: neural retina Strong Regionally restricted euxassay_009545_23
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009545_23
TS23: facial ganglion Strong Regionally restricted euxassay_009545_23
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_23
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_23
TS23: hand Weak Regionally restricted euxassay_009545_23
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_23
TS23: diaphragm Weak Regionally restricted euxassay_009545_23
Specimen euxassay_009545_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_009545_24
TS23: neural retina Strong Regionally restricted euxassay_009545_24
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009545_24
TS23: upper leg muscle Weak Regionally restricted euxassay_009545_24
TS23: hand Weak Regionally restricted euxassay_009545_24
TS23: upper arm muscle Weak Regionally restricted euxassay_009545_24
TS23: diaphragm Weak Regionally restricted euxassay_009545_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory