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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824237
Gene symbol: Brinp1
Gene name: bone morphogenic protein/retinoic acid inducible neural specific 1
Probe: T31747
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010001_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_010001_02
Specimen euxassay_010001_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_010001_03
Specimen euxassay_010001_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_010001_04
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_010001_04
Specimen euxassay_010001_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_05
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_010001_05
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_010001_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_05
Specimen euxassay_010001_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010001_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010001_06
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_010001_06
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_010001_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_010001_06
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_06
TS23: dorsal grey horn Moderate Regionally restricted euxassay_010001_06
Specimen euxassay_010001_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_07
TS23: glossopharyngeal ganglion Strong Single cells euxassay_010001_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010001_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010001_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_010001_07
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_010001_07
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_010001_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_010001_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_07
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_07
TS23: dorsal grey horn Moderate Regionally restricted euxassay_010001_07
Specimen euxassay_010001_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_08
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_010001_08
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_010001_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_08
TS23: dorsal grey horn Moderate Regionally restricted euxassay_010001_08
Specimen euxassay_010001_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_09
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_010001_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_09
TS23: dorsal grey horn Weak Regionally restricted euxassay_010001_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_09
Specimen euxassay_010001_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_010001_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_010001_10
TS23: dorsal grey horn Moderate Regionally restricted euxassay_010001_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_10
Specimen euxassay_010001_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010001_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_010001_11
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_010001_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_11
TS23: dorsal grey horn Moderate Regionally restricted euxassay_010001_11
Specimen euxassay_010001_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_12
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_010001_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_010001_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_010001_12
TS23: dorsal grey horn Weak Regionally restricted euxassay_010001_12
Specimen euxassay_010001_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_010001_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_010001_13
TS23: dorsal grey horn Moderate Regionally restricted euxassay_010001_13
TS23: ventral grey horn Weak Regionally restricted euxassay_010001_13
Specimen euxassay_010001_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_010001_14
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_010001_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_14
Specimen euxassay_010001_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_010001_15
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_15
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_010001_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_010001_15
Specimen euxassay_010001_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_16
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_010001_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_16
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_16
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_010001_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_16
Specimen euxassay_010001_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Single cells euxassay_010001_17
TS23: trigeminal ganglion Strong Single cells euxassay_010001_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010001_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_17
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_010001_17
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010001_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010001_17
Specimen euxassay_010001_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_18
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_010001_18
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_010001_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_010001_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_010001_18
Specimen euxassay_010001_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010001_19
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_010001_19
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_010001_19
Specimen euxassay_010001_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_010001_20
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_20
Specimen euxassay_010001_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_010001_21
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_010001_21
Specimen euxassay_010001_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010001_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory