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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824099
Gene symbol: Ctcfl
Gene name: CCCTC-binding factor like
Probe: T55029
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019660_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_019660_01
Specimen euxassay_019660_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Single cells euxassay_019660_02
Specimen euxassay_019660_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_03
TS23: telencephalon mantle layer Moderate Single cells euxassay_019660_03
Specimen euxassay_019660_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_04
TS23: facial ganglion Moderate Single cells euxassay_019660_04
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_04
Specimen euxassay_019660_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_05
TS23: facial ganglion Moderate Single cells euxassay_019660_05
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_05
Specimen euxassay_019660_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_06
TS23: facial ganglion Moderate Single cells euxassay_019660_06
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_06
Specimen euxassay_019660_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_019660_07
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_07
TS23: dorsal root ganglion Weak Single cells euxassay_019660_07
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_07
Specimen euxassay_019660_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_08
TS23: vagus ganglion Moderate Single cells euxassay_019660_08
TS23: dorsal root ganglion Weak Single cells euxassay_019660_08
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_08
TS23: pons mantle layer Moderate Single cells euxassay_019660_08
Specimen euxassay_019660_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_09
TS23: dorsal root ganglion Weak Single cells euxassay_019660_09
Specimen euxassay_019660_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Single cells euxassay_019660_10
TS23: pons mantle layer Moderate Single cells euxassay_019660_10
TS23: ventral grey horn Weak Single cells euxassay_019660_10
Specimen euxassay_019660_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Single cells euxassay_019660_11
TS23: pons mantle layer Moderate Single cells euxassay_019660_11
TS23: ventral grey horn Weak Single cells euxassay_019660_11
Specimen euxassay_019660_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_019660_13
TS23: ventral grey horn Moderate Single cells euxassay_019660_13
Specimen euxassay_019660_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Single cells euxassay_019660_14
TS23: ventral grey horn Moderate Single cells euxassay_019660_14
Specimen euxassay_019660_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_019660_15
TS23: pons mantle layer Moderate Single cells euxassay_019660_15
TS23: ventral grey horn Weak Regionally restricted euxassay_019660_15
Specimen euxassay_019660_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_019660_16
TS23: pons mantle layer Moderate Single cells euxassay_019660_16
TS23: ventral grey horn Moderate Single cells euxassay_019660_16
Specimen euxassay_019660_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_17
TS23: vagus ganglion Weak Single cells euxassay_019660_17
TS23: dorsal root ganglion Moderate Single cells euxassay_019660_17
TS23: pons mantle layer Moderate Single cells euxassay_019660_17
Specimen euxassay_019660_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Single cells euxassay_019660_18
TS23: trigeminal ganglion Weak Single cells euxassay_019660_18
TS23: dorsal root ganglion Moderate Single cells euxassay_019660_18
Specimen euxassay_019660_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_19
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_019660_19
TS23: telencephalon mantle layer Moderate Single cells euxassay_019660_19
Specimen euxassay_019660_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Single cells euxassay_019660_20
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_20
Specimen euxassay_019660_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Single cells euxassay_019660_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory