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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824082
Gene symbol: Csn1s2a
Gene name: casein alpha s2-like A
Probe: T36207
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011051_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011051_01
TS23: forebrain Moderate Uniform euxassay_011051_01
TS23: hindbrain Moderate Uniform euxassay_011051_01
Specimen euxassay_011051_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011051_02
TS23: hindbrain Moderate Uniform euxassay_011051_02
TS23: forebrain Moderate Uniform euxassay_011051_02
TS23: rib Weak Regionally restricted euxassay_011051_02
Specimen euxassay_011051_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011051_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_03
TS23: facial ganglion Strong Regionally restricted euxassay_011051_03
TS23: hindbrain Moderate Uniform euxassay_011051_03
TS23: forebrain Moderate Uniform euxassay_011051_03
TS23: rib Weak Regionally restricted euxassay_011051_03
Specimen euxassay_011051_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011051_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_04
TS23: facial ganglion Strong Regionally restricted euxassay_011051_04
TS23: midbrain Moderate Uniform euxassay_011051_04
TS23: hindbrain Moderate Uniform euxassay_011051_04
TS23: forebrain Moderate Uniform euxassay_011051_04
TS23: rib Weak Regionally restricted euxassay_011051_04
Specimen euxassay_011051_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011051_05
TS23: facial ganglion Strong Regionally restricted euxassay_011051_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011051_05
TS23: midbrain Moderate Uniform euxassay_011051_05
TS23: hindbrain Moderate Uniform euxassay_011051_05
TS23: forebrain Moderate Uniform euxassay_011051_05
TS23: mandible Weak Regionally restricted euxassay_011051_05
TS23: rib Weak Regionally restricted euxassay_011051_05
Specimen euxassay_011051_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011051_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011051_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_06
TS23: midbrain Moderate Uniform euxassay_011051_06
TS23: hindbrain Moderate Uniform euxassay_011051_06
TS23: forebrain Moderate Uniform euxassay_011051_06
TS23: mandible Weak Regionally restricted euxassay_011051_06
TS23: maxilla Weak Regionally restricted euxassay_011051_06
TS23: rib Weak Regionally restricted euxassay_011051_06
Specimen euxassay_011051_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011051_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011051_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_07
TS23: midbrain Moderate Uniform euxassay_011051_07
TS23: hindbrain Moderate Uniform euxassay_011051_07
TS23: forebrain Moderate Uniform euxassay_011051_07
TS23: spinal cord Moderate Uniform euxassay_011051_07
TS23: maxilla Weak Regionally restricted euxassay_011051_07
TS23: mandible Weak Regionally restricted euxassay_011051_07
TS23: rib Weak Regionally restricted euxassay_011051_07
Specimen euxassay_011051_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Moderate Regionally restricted euxassay_011051_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_08
TS23: midbrain Weak Uniform euxassay_011051_08
TS23: hindbrain Weak Uniform euxassay_011051_08
TS23: forebrain Weak Uniform euxassay_011051_08
TS23: spinal cord Weak Uniform euxassay_011051_08
TS23: maxilla Weak Regionally restricted euxassay_011051_08
TS23: mandible Weak Regionally restricted euxassay_011051_08
TS23: rib Weak Regionally restricted euxassay_011051_08
TS23: clavicle Weak Regionally restricted euxassay_011051_08
Specimen euxassay_011051_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011051_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_09
TS23: vagus ganglion Moderate Regionally restricted euxassay_011051_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_09
TS23: spinal cord Moderate Uniform euxassay_011051_09
TS23: midbrain Moderate Uniform euxassay_011051_09
TS23: hindbrain Moderate Uniform euxassay_011051_09
TS23: forebrain Moderate Uniform euxassay_011051_09
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011051_09
TS23: cervical ganglion Weak Regionally restricted euxassay_011051_09
TS23: maxilla Weak Regionally restricted euxassay_011051_09
TS23: mandible Weak Regionally restricted euxassay_011051_09
TS23: rib Weak Regionally restricted euxassay_011051_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_09
TS23: clavicle Moderate Regionally restricted euxassay_011051_09
Specimen euxassay_011051_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011051_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_10
TS23: spinal cord Moderate Uniform euxassay_011051_10
TS23: midbrain Moderate Uniform euxassay_011051_10
TS23: hindbrain Moderate Uniform euxassay_011051_10
TS23: forebrain Moderate Uniform euxassay_011051_10
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011051_10
TS23: maxilla Weak Regionally restricted euxassay_011051_10
TS23: mandible Weak Regionally restricted euxassay_011051_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_10
Specimen euxassay_011051_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_11
TS23: spinal cord Moderate Uniform euxassay_011051_11
TS23: midbrain Moderate Uniform euxassay_011051_11
TS23: hindbrain Moderate Uniform euxassay_011051_11
TS23: forebrain Moderate Uniform euxassay_011051_11
TS23: maxilla Weak Regionally restricted euxassay_011051_11
TS23: mandible Weak Regionally restricted euxassay_011051_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_11
Specimen euxassay_011051_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_12
TS23: spinal cord Moderate Uniform euxassay_011051_12
TS23: midbrain Moderate Uniform euxassay_011051_12
TS23: hindbrain Moderate Uniform euxassay_011051_12
TS23: forebrain Moderate Uniform euxassay_011051_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_12
Specimen euxassay_011051_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_13
TS23: spinal cord Moderate Uniform euxassay_011051_13
TS23: midbrain Moderate Uniform euxassay_011051_13
TS23: hindbrain Moderate Uniform euxassay_011051_13
TS23: forebrain Moderate Uniform euxassay_011051_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_13
TS23: vomeronasal organ Weak Regionally restricted euxassay_011051_13
Specimen euxassay_011051_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_011051_14
TS23: midbrain Moderate Uniform euxassay_011051_14
TS23: hindbrain Moderate Uniform euxassay_011051_14
TS23: forebrain Moderate Uniform euxassay_011051_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_011051_14
Specimen euxassay_011051_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_15
TS23: spinal cord Moderate Uniform euxassay_011051_15
TS23: midbrain Moderate Uniform euxassay_011051_15
TS23: hindbrain Moderate Uniform euxassay_011051_15
TS23: forebrain Moderate Uniform euxassay_011051_15
TS23: thoracic ganglion Weak Regionally restricted euxassay_011051_15
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011051_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_15
Specimen euxassay_011051_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_16
TS23: spinal cord Moderate Uniform euxassay_011051_16
TS23: midbrain Moderate Uniform euxassay_011051_16
TS23: hindbrain Moderate Uniform euxassay_011051_16
TS23: forebrain Moderate Uniform euxassay_011051_16
TS23: cervical ganglion Weak Regionally restricted euxassay_011051_16
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011051_16
TS23: maxilla Weak Regionally restricted euxassay_011051_16
TS23: mandible Weak Regionally restricted euxassay_011051_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_16
TS23: vomeronasal organ Weak Regionally restricted euxassay_011051_16
TS23: clavicle Weak Regionally restricted euxassay_011051_16
Specimen euxassay_011051_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011051_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011051_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011051_17
TS23: vagus ganglion Strong Regionally restricted euxassay_011051_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_17
TS23: spinal cord Moderate Uniform euxassay_011051_17
TS23: hindbrain Moderate Uniform euxassay_011051_17
TS23: midbrain Moderate Uniform euxassay_011051_17
TS23: forebrain Moderate Uniform euxassay_011051_17
TS23: mandible Weak Regionally restricted euxassay_011051_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_17
TS23: clavicle Moderate Regionally restricted euxassay_011051_17
Specimen euxassay_011051_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011051_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011051_18
TS23: trigeminal nerve Strong Regionally restricted euxassay_011051_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_18
TS23: spinal cord Moderate Uniform euxassay_011051_18
TS23: midbrain Moderate Uniform euxassay_011051_18
TS23: hindbrain Moderate Uniform euxassay_011051_18
TS23: forebrain Moderate Uniform euxassay_011051_18
TS23: mandible Weak Regionally restricted euxassay_011051_18
TS23: rib Weak Regionally restricted euxassay_011051_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_18
Specimen euxassay_011051_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_19
TS23: facial ganglion Strong Regionally restricted euxassay_011051_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011051_19
TS23: midbrain Moderate Uniform euxassay_011051_19
TS23: hindbrain Moderate Uniform euxassay_011051_19
TS23: forebrain Moderate Uniform euxassay_011051_19
TS23: mandible Weak Regionally restricted euxassay_011051_19
TS23: maxilla Weak Regionally restricted euxassay_011051_19
TS23: rib Weak Regionally restricted euxassay_011051_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_19
Specimen euxassay_011051_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_20
TS23: facial ganglion Strong Regionally restricted euxassay_011051_20
TS23: hindbrain Moderate Uniform euxassay_011051_20
TS23: forebrain Moderate Uniform euxassay_011051_20
TS23: maxilla Weak Regionally restricted euxassay_011051_20
TS23: mandible Weak Regionally restricted euxassay_011051_20
TS23: rib Weak Regionally restricted euxassay_011051_20
TS23: olfactory epithelium Weak Regionally restricted euxassay_011051_20
Specimen euxassay_011051_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_21
TS23: facial ganglion Strong Regionally restricted euxassay_011051_21
TS23: hindbrain Moderate Uniform euxassay_011051_21
TS23: forebrain Moderate Uniform euxassay_011051_21
TS23: maxilla Weak Regionally restricted euxassay_011051_21
TS23: mandible Weak Regionally restricted euxassay_011051_21
TS23: rib Weak Regionally restricted euxassay_011051_21
Specimen euxassay_011051_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011051_22
TS23: forebrain Moderate Uniform euxassay_011051_22
TS23: maxilla Weak Regionally restricted euxassay_011051_22
TS23: mandible Weak Regionally restricted euxassay_011051_22
TS23: rib Weak Regionally restricted euxassay_011051_22
Specimen euxassay_011051_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011051_23
TS23: forebrain Moderate Uniform euxassay_011051_23
TS23: mandible Weak Regionally restricted euxassay_011051_23
TS23: maxilla Weak Regionally restricted euxassay_011051_23
TS23: rib Weak Regionally restricted euxassay_011051_23
Specimen euxassay_011051_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_011051_24
TS23: forebrain Moderate Uniform euxassay_011051_24
TS23: rib Weak Regionally restricted euxassay_011051_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory