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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824031
Gene symbol: Cpne4
Gene name: copine IV
Probe: MGC clone 69723
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005273_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_01
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_01
Specimen euxassay_005273_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_02
TS23: facial ganglion Strong Regionally restricted euxassay_005273_02
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_02
Specimen euxassay_005273_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_03
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_03
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_03
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_03
Specimen euxassay_005273_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_04
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_04
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_04
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_04
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_04
Specimen euxassay_005273_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_05
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_05
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_05
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_005273_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_05
Specimen euxassay_005273_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005273_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_06
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_06
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_005273_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_06
Specimen euxassay_005273_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005273_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_07
TS23: vagus ganglion Strong Regionally restricted euxassay_005273_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_07
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_07
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_005273_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_07
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_07
TS23: metencephalon Strong Regionally restricted euxassay_005273_07
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_07
Specimen euxassay_005273_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_08
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_08
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_08
TS23: epithalamus Strong Regionally restricted euxassay_005273_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_08
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_08
TS23: metencephalon Strong Regionally restricted euxassay_005273_08
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_08
Specimen euxassay_005273_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_09
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_005273_09
TS23: epithalamus Strong Regionally restricted euxassay_005273_09
TS23: hypothalamus Moderate Regionally restricted euxassay_005273_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_005273_09
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_09
TS23: metencephalon Strong Regionally restricted euxassay_005273_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_09
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_09
Specimen euxassay_005273_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_10
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_10
TS23: hypothalamus Strong Regionally restricted euxassay_005273_10
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_10
TS23: metencephalon Strong Regionally restricted euxassay_005273_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_10
Specimen euxassay_005273_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_11
TS23: cerebral cortex Moderate Regionally restricted euxassay_005273_11
TS23: epithalamus Strong Regionally restricted euxassay_005273_11
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_11
TS23: metencephalon Strong Regionally restricted euxassay_005273_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_11
Specimen euxassay_005273_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_12
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_12
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_005273_12
TS23: epithalamus Strong Regionally restricted euxassay_005273_12
TS23: hypothalamus Moderate Regionally restricted euxassay_005273_12
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_12
TS23: metencephalon Strong Regionally restricted euxassay_005273_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_12
Specimen euxassay_005273_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_005273_13
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_13
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_005273_13
TS23: hypothalamus Moderate Regionally restricted euxassay_005273_13
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_13
TS23: metencephalon Strong Regionally restricted euxassay_005273_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_13
Specimen euxassay_005273_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_14
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_14
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_005273_14
TS23: hypothalamus Moderate Regionally restricted euxassay_005273_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_14
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_14
TS23: metencephalon Strong Regionally restricted euxassay_005273_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_005273_14
Specimen euxassay_005273_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_15
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_15
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_15
TS23: diencephalon Strong Regionally restricted euxassay_005273_15
TS23: hypothalamus Moderate Regionally restricted euxassay_005273_15
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_15
TS23: metencephalon Strong Regionally restricted euxassay_005273_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_15
Specimen euxassay_005273_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_16
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005273_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_16
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_16
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_16
TS23: medulla oblongata Strong Regionally restricted euxassay_005273_16
TS23: metencephalon Strong Regionally restricted euxassay_005273_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_005273_16
Specimen euxassay_005273_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_005273_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005273_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_17
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_17
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_17
Specimen euxassay_005273_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005273_18
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_18
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_18
Specimen euxassay_005273_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_19
TS23: facial ganglion Strong Regionally restricted euxassay_005273_19
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_19
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_005273_19
Specimen euxassay_005273_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005273_20
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_005273_20
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_20
Specimen euxassay_005273_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory lobe Strong Regionally restricted euxassay_005273_21
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_21
Specimen euxassay_005273_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_22
Specimen euxassay_005273_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_005273_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory