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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824014
Gene symbol: Cotl1
Gene name: coactosin like F-actin binding protein 1
Probe: EH3217 probe 3158
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010951_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010951_01
TS23: lens Strong Regionally restricted euxassay_010951_01
TS23: neural retina Strong Regionally restricted euxassay_010951_01
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_01
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_01
TS23: embryo Strong Spotted euxassay_010951_01
Specimen euxassay_010951_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010951_02
TS23: neural retina Strong Regionally restricted euxassay_010951_02
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_02
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_02
TS23: embryo Strong Spotted euxassay_010951_02
Specimen euxassay_010951_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010951_03
TS23: neural retina Strong Regionally restricted euxassay_010951_03
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_03
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_03
TS23: embryo Strong Spotted euxassay_010951_03
Specimen euxassay_010951_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010951_04
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_04
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_04
TS23: embryo Strong Spotted euxassay_010951_04
Specimen euxassay_010951_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010951_05
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_05
TS23: embryo Strong Spotted euxassay_010951_05
Specimen euxassay_010951_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_010951_06
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_06
TS23: embryo Strong Spotted euxassay_010951_06
Specimen euxassay_010951_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_07
TS23: renal cortex Strong Regionally restricted euxassay_010951_07
TS23: stomach Strong Regionally restricted euxassay_010951_07
TS23: midgut Strong Regionally restricted euxassay_010951_07
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_07
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_07
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010951_07
TS23: embryo Strong Spotted euxassay_010951_07
Specimen euxassay_010951_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_08
TS23: renal cortex Strong Regionally restricted euxassay_010951_08
TS23: stomach Strong Regionally restricted euxassay_010951_08
TS23: midgut Strong Regionally restricted euxassay_010951_08
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_08
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_08
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010951_08
TS23: embryo Strong Spotted euxassay_010951_08
Specimen euxassay_010951_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_09
TS23: renal cortex Strong Regionally restricted euxassay_010951_09
TS23: stomach Strong Regionally restricted euxassay_010951_09
TS23: midgut Strong Regionally restricted euxassay_010951_09
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_09
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_09
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010951_09
TS23: embryo Strong Spotted euxassay_010951_09
Specimen euxassay_010951_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_10
TS23: renal cortex Strong Regionally restricted euxassay_010951_10
TS23: midgut Strong Regionally restricted euxassay_010951_10
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_10
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_10
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010951_10
TS23: embryo Strong Spotted euxassay_010951_10
Specimen euxassay_010951_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_11
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_010951_11
TS23: midgut Strong Regionally restricted euxassay_010951_11
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_11
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_11
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010951_11
TS23: embryo Strong Spotted euxassay_010951_11
TS23: thymus primordium Moderate Regionally restricted euxassay_010951_11
TS23: pharynx epithelium Moderate Regionally restricted euxassay_010951_11
Specimen euxassay_010951_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_12
TS23: midgut Strong Regionally restricted euxassay_010951_12
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_12
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_12
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_12
TS23: thalamus ventricular layer Moderate Regionally restricted euxassay_010951_12
TS23: embryo Strong Spotted euxassay_010951_12
TS23: thymus primordium Moderate Regionally restricted euxassay_010951_12
TS23: pharynx epithelium Moderate Regionally restricted euxassay_010951_12
TS23: esophagus epithelium Moderate Regionally restricted euxassay_010951_12
Specimen euxassay_010951_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_13
TS23: midgut Strong Regionally restricted euxassay_010951_13
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_13
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_13
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_13
TS23: thalamus ventricular layer Moderate Regionally restricted euxassay_010951_13
TS23: embryo Strong Spotted euxassay_010951_13
TS23: thymus primordium Moderate Regionally restricted euxassay_010951_13
TS23: pharynx epithelium Moderate Regionally restricted euxassay_010951_13
TS23: esophagus epithelium Moderate Regionally restricted euxassay_010951_13
Specimen euxassay_010951_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_14
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_010951_14
TS23: midgut Strong Regionally restricted euxassay_010951_14
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_14
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_14
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_14
TS23: embryo Strong Spotted euxassay_010951_14
TS23: thymus primordium Moderate Regionally restricted euxassay_010951_14
TS23: trachea Moderate Regionally restricted euxassay_010951_14
Specimen euxassay_010951_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_15
TS23: midgut Strong Regionally restricted euxassay_010951_15
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_15
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_15
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010951_15
TS23: embryo Strong Spotted euxassay_010951_15
TS23: thymus primordium Moderate Regionally restricted euxassay_010951_15
TS23: trachea Moderate Regionally restricted euxassay_010951_15
Specimen euxassay_010951_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_16
TS23: midgut Strong Regionally restricted euxassay_010951_16
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_16
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010951_16
TS23: embryo Strong Spotted euxassay_010951_16
Specimen euxassay_010951_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_17
TS23: renal cortex Strong Regionally restricted euxassay_010951_17
TS23: midgut Strong Regionally restricted euxassay_010951_17
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_17
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_17
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010951_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010951_17
TS23: embryo Strong Spotted euxassay_010951_17
Specimen euxassay_010951_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_18
TS23: renal cortex Strong Regionally restricted euxassay_010951_18
TS23: midgut Strong Regionally restricted euxassay_010951_18
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_18
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_18
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_010951_18
TS23: embryo Strong Spotted euxassay_010951_18
Specimen euxassay_010951_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_010951_19
TS23: renal cortex Strong Regionally restricted euxassay_010951_19
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_19
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_19
TS23: embryo Strong Spotted euxassay_010951_19
Specimen euxassay_010951_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_010951_20
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_20
TS23: embryo Strong Spotted euxassay_010951_20
Specimen euxassay_010951_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_21
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_21
TS23: embryo Strong Spotted euxassay_010951_21
Specimen euxassay_010951_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_22
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_010951_22
TS23: embryo Strong Spotted euxassay_010951_22
Specimen euxassay_010951_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010951_23
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_23
TS23: embryo Strong Spotted euxassay_010951_23
Specimen euxassay_010951_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_010951_24
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_010951_24
TS23: embryo Strong Spotted euxassay_010951_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory