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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823976
Gene symbol: Col13a1
Gene name: collagen, type XIII, alpha 1
Probe: MGC clone 36116
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001196_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_01
TS23: limb musculature Present euxassay_001196_01
Specimen euxassay_001196_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_02
TS23: limb musculature Present euxassay_001196_02
Specimen euxassay_001196_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_03
TS23: limb musculature Present euxassay_001196_03
Specimen euxassay_001196_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_04
TS23: limb musculature Present euxassay_001196_04
TS23: skeleton Moderate Regionally restricted euxassay_001196_04 periosteum
Specimen euxassay_001196_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_05
TS23: limb musculature Present euxassay_001196_05
TS23: skeleton Moderate Regionally restricted euxassay_001196_05 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_05
TS23: lung Weak Regionally restricted euxassay_001196_05
Specimen euxassay_001196_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_06
TS23: limb musculature Present euxassay_001196_06
TS23: skeleton Moderate Regionally restricted euxassay_001196_06 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_06
TS23: lung Weak Regionally restricted euxassay_001196_06
Specimen euxassay_001196_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_07 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_07
TS23: vibrissa Weak Regionally restricted euxassay_001196_07
TS23: lung Weak Regionally restricted euxassay_001196_07
Specimen euxassay_001196_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_08 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_08
TS23: vibrissa Weak Regionally restricted euxassay_001196_08
TS23: lung Weak Regionally restricted euxassay_001196_08
Specimen euxassay_001196_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_09
TS23: limb musculature Present euxassay_001196_09
TS23: skeleton Moderate Regionally restricted euxassay_001196_09 periosteum
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_09
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_09
TS23: clavicle Weak Regionally restricted euxassay_001196_09
TS23: lung Weak Regionally restricted euxassay_001196_09
Specimen euxassay_001196_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_10
TS23: limb musculature Present euxassay_001196_10
TS23: skeleton Moderate Regionally restricted euxassay_001196_10 periosteum
TS23: lower jaw molar Moderate Regionally restricted euxassay_001196_10
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_10
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_10
TS23: vibrissa Weak Regionally restricted euxassay_001196_10
TS23: diaphragm Weak Regionally restricted euxassay_001196_10
TS23: clavicle Weak Regionally restricted euxassay_001196_10
TS23: lung Weak Regionally restricted euxassay_001196_10
Specimen euxassay_001196_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_11 periosteum
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_11
TS23: lower jaw molar Moderate Regionally restricted euxassay_001196_11
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_11
TS23: vibrissa Weak Regionally restricted euxassay_001196_11
TS23: diaphragm Weak Regionally restricted euxassay_001196_11
TS23: clavicle Weak Regionally restricted euxassay_001196_11
TS23: lung Weak Regionally restricted euxassay_001196_11
Specimen euxassay_001196_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_12 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_12
TS23: vibrissa Weak Regionally restricted euxassay_001196_12
TS23: diaphragm Weak Regionally restricted euxassay_001196_12
TS23: clavicle Weak Regionally restricted euxassay_001196_12
TS23: lung Weak Regionally restricted euxassay_001196_12
Specimen euxassay_001196_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001196_13
TS23: diaphragm Weak Regionally restricted euxassay_001196_13
TS23: tail Moderate Regionally restricted euxassay_001196_13 muscle
TS23: lung Weak Regionally restricted euxassay_001196_13
Specimen euxassay_001196_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001196_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001196_14
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_14
TS23: diaphragm Weak Regionally restricted euxassay_001196_14
TS23: genital tubercle of male Weak Regionally restricted euxassay_001196_14
TS23: tail Moderate Regionally restricted euxassay_001196_14 muscle
TS23: lung Weak Regionally restricted euxassay_001196_14
TS23: esophagus Weak Regionally restricted euxassay_001196_14
Specimen euxassay_001196_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_15 periosteum
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001196_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001196_15
TS23: diaphragm Weak Regionally restricted euxassay_001196_15
TS23: genital tubercle of male Weak Regionally restricted euxassay_001196_15
TS23: bladder Weak Regionally restricted euxassay_001196_15
TS23: tail Moderate Regionally restricted euxassay_001196_15 muscle
TS23: lung Weak Regionally restricted euxassay_001196_15
TS23: esophagus Weak Regionally restricted euxassay_001196_15
TS23: trachea epithelium Weak Regionally restricted euxassay_001196_15
Specimen euxassay_001196_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_16 periosteum
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001196_16
TS23: diaphragm Weak Regionally restricted euxassay_001196_16
TS23: genital tubercle of male Weak Regionally restricted euxassay_001196_16
TS23: bladder Weak Regionally restricted euxassay_001196_16
TS23: lung Weak Regionally restricted euxassay_001196_16
TS23: trachea epithelium Weak Regionally restricted euxassay_001196_16
TS23: external naris Moderate Regionally restricted euxassay_001196_16
Specimen euxassay_001196_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001196_17
TS23: diaphragm Weak Regionally restricted euxassay_001196_17
TS23: genital tubercle of male Weak Regionally restricted euxassay_001196_17
TS23: bladder Weak Regionally restricted euxassay_001196_17
TS23: lung Weak Regionally restricted euxassay_001196_17
TS23: trachea epithelium Weak Regionally restricted euxassay_001196_17
Specimen euxassay_001196_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001196_18
TS23: diaphragm Weak Regionally restricted euxassay_001196_18
TS23: genital tubercle of male Weak Regionally restricted euxassay_001196_18
TS23: tail Moderate Regionally restricted euxassay_001196_18 muscle
TS23: lung Weak Regionally restricted euxassay_001196_18
Specimen euxassay_001196_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001196_19
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001196_19
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_19
TS23: diaphragm Weak Regionally restricted euxassay_001196_19
TS23: tail Moderate Regionally restricted euxassay_001196_19 muscle
TS23: clavicle Weak Regionally restricted euxassay_001196_19
TS23: lung Weak Regionally restricted euxassay_001196_19
Specimen euxassay_001196_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_20 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_20
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001196_20
TS23: diaphragm Weak Regionally restricted euxassay_001196_20
TS23: tail Moderate Regionally restricted euxassay_001196_20 muscle
TS23: clavicle Weak Regionally restricted euxassay_001196_20
TS23: lung Weak Regionally restricted euxassay_001196_20
Specimen euxassay_001196_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_21 periosteum
TS23: lower jaw molar Moderate Regionally restricted euxassay_001196_21
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_21
TS23: diaphragm Weak Regionally restricted euxassay_001196_21
TS23: clavicle Weak Regionally restricted euxassay_001196_21
TS23: lung Weak Regionally restricted euxassay_001196_21
Specimen euxassay_001196_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_001196_22 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_22
TS23: lower jaw molar Moderate Regionally restricted euxassay_001196_22
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_22
TS23: clavicle Weak Regionally restricted euxassay_001196_22
TS23: lung Weak Regionally restricted euxassay_001196_22
Specimen euxassay_001196_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_23
TS23: limb musculature Present euxassay_001196_23
TS23: skeleton Moderate Regionally restricted euxassay_001196_23 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_23
TS23: lower jaw molar Moderate Regionally restricted euxassay_001196_23
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_23
TS23: vibrissa Weak Regionally restricted euxassay_001196_23
TS23: lung Weak Regionally restricted euxassay_001196_23
Specimen euxassay_001196_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_001196_24
TS23: limb musculature Present euxassay_001196_24
TS23: skeleton Moderate Regionally restricted euxassay_001196_24 periosteum
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001196_24
TS23: upper jaw molar Moderate Regionally restricted euxassay_001196_24
TS23: vibrissa Weak Regionally restricted euxassay_001196_24
TS23: lung Weak Regionally restricted euxassay_001196_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory