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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823975
Gene symbol: Col13a1
Gene name: collagen, type XIII, alpha 1
Probe: MGC clone 36116
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003080_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_04
Specimen euxassay_003080_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_05
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_05
Specimen euxassay_003080_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_06
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_06
Specimen euxassay_003080_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_07
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_07
TS23: vibrissa Moderate Regionally restricted euxassay_003080_07
TS23: diaphragm Weak Regionally restricted euxassay_003080_07
Specimen euxassay_003080_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_08
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_08
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_08
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_08
TS23: vibrissa Moderate Regionally restricted euxassay_003080_08
TS23: diaphragm Weak Regionally restricted euxassay_003080_08
Specimen euxassay_003080_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_09
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_09
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_09
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_09
TS23: diaphragm Weak Regionally restricted euxassay_003080_09
Specimen euxassay_003080_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_10
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_10
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_10
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_10
TS23: vibrissa Moderate Regionally restricted euxassay_003080_10
TS23: diaphragm Moderate Regionally restricted euxassay_003080_10
Specimen euxassay_003080_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_11
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_11
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_11
TS23: vibrissa Moderate Regionally restricted euxassay_003080_11
TS23: diaphragm Moderate Regionally restricted euxassay_003080_11
Specimen euxassay_003080_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_12
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_12
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_12
TS23: vibrissa Moderate Regionally restricted euxassay_003080_12
TS23: diaphragm Moderate Regionally restricted euxassay_003080_12
Specimen euxassay_003080_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_003080_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_003080_13
TS23: diaphragm Strong Regionally restricted euxassay_003080_13
Specimen euxassay_003080_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_003080_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_003080_14
TS23: diaphragm Strong Regionally restricted euxassay_003080_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_003080_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003080_14
Specimen euxassay_003080_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_003080_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_003080_15
TS23: diaphragm Moderate Regionally restricted euxassay_003080_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_003080_15
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003080_15
Specimen euxassay_003080_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_003080_16
TS23: diaphragm Strong Regionally restricted euxassay_003080_16
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003080_16
Specimen euxassay_003080_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_003080_17
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003080_17
Specimen euxassay_003080_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Strong Regionally restricted euxassay_003080_18
TS23: diaphragm Strong Regionally restricted euxassay_003080_18
TS23: tail mesenchyme Moderate Regionally restricted euxassay_003080_18
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003080_18
Specimen euxassay_003080_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_003080_19
TS23: lower jaw incisor Strong Regionally restricted euxassay_003080_19
TS23: diaphragm Strong Regionally restricted euxassay_003080_19
TS23: tail mesenchyme Moderate Regionally restricted euxassay_003080_19
Specimen euxassay_003080_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_20
TS23: upper jaw incisor Strong Regionally restricted euxassay_003080_20
TS23: lower jaw incisor Strong Regionally restricted euxassay_003080_20
TS23: diaphragm Strong Regionally restricted euxassay_003080_20
Specimen euxassay_003080_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_21
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_21
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_21
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_21
TS23: diaphragm Moderate Regionally restricted euxassay_003080_21
Specimen euxassay_003080_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_22
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_22
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_22
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_22
TS23: diaphragm Weak Regionally restricted euxassay_003080_22
Specimen euxassay_003080_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_23
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_23
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_23
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_23
TS23: diaphragm Weak Regionally restricted euxassay_003080_23
Specimen euxassay_003080_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003080_24
TS23: Meckel's cartilage Strong Regionally restricted euxassay_003080_24
TS23: lower jaw molar Strong Regionally restricted euxassay_003080_24
TS23: upper jaw molar Strong Regionally restricted euxassay_003080_24
TS23: vibrissa Moderate Regionally restricted euxassay_003080_24
TS23: diaphragm Weak Regionally restricted euxassay_003080_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory