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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823967
Gene symbol: Cobl
Gene name: cordon-bleu WH2 repeat
Probe: IMAGE clone 1247884
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014151_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_01
Specimen euxassay_014151_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_014151_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_02
Specimen euxassay_014151_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_014151_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_03
Specimen euxassay_014151_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_014151_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_04
Specimen euxassay_014151_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_014151_05
TS23: left lung Strong Regionally restricted euxassay_014151_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_05
Specimen euxassay_014151_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_014151_06
TS23: left lung Strong Regionally restricted euxassay_014151_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_06
Specimen euxassay_014151_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_014151_07
TS23: left lung Strong Regionally restricted euxassay_014151_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_014151_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_07
Specimen euxassay_014151_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_08
TS23: stomach Strong Regionally restricted euxassay_014151_08
TS23: left lung Strong Regionally restricted euxassay_014151_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014151_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014151_08
Specimen euxassay_014151_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_09
TS23: stomach Strong Regionally restricted euxassay_014151_09
TS23: left lung Strong Regionally restricted euxassay_014151_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014151_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014151_09
Specimen euxassay_014151_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_10
TS23: stomach Strong Regionally restricted euxassay_014151_10
TS23: left lung Strong Regionally restricted euxassay_014151_10
TS23: aorta Strong Regionally restricted euxassay_014151_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_10
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_014151_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014151_10
Specimen euxassay_014151_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_11
TS23: left lung Strong Regionally restricted euxassay_014151_11
TS23: aorta Strong Regionally restricted euxassay_014151_11
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_014151_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014151_11
Specimen euxassay_014151_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_12
TS23: left lung Strong Regionally restricted euxassay_014151_12
TS23: aorta Strong Regionally restricted euxassay_014151_12
TS23: bladder Moderate Regionally restricted euxassay_014151_12
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_014151_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014151_12
Specimen euxassay_014151_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_13
TS23: left lung Strong Regionally restricted euxassay_014151_13
TS23: aorta Strong Regionally restricted euxassay_014151_13
TS23: bladder Moderate Regionally restricted euxassay_014151_13
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_014151_13
Specimen euxassay_014151_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_14
TS23: left lung Strong Regionally restricted euxassay_014151_14
TS23: right lung Strong Regionally restricted euxassay_014151_14
TS23: bladder Moderate Regionally restricted euxassay_014151_14
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014151_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_014151_14
Specimen euxassay_014151_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_15
TS23: right lung Strong Regionally restricted euxassay_014151_15
TS23: bladder Moderate Regionally restricted euxassay_014151_15
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_15
TS23: external naris epithelium Moderate Regionally restricted euxassay_014151_15
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_014151_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014151_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_014151_15
Specimen euxassay_014151_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_16
TS23: right lung Strong Regionally restricted euxassay_014151_16
TS23: bladder Moderate Regionally restricted euxassay_014151_16
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014151_16
TS23: external naris epithelium Moderate Regionally restricted euxassay_014151_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014151_16
Specimen euxassay_014151_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_17
TS23: right lung Strong Regionally restricted euxassay_014151_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_014151_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014151_17
Specimen euxassay_014151_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_014151_18
TS23: right lung Strong Regionally restricted euxassay_014151_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_014151_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_18
Specimen euxassay_014151_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_014151_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014151_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_014151_19
Specimen euxassay_014151_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_014151_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014151_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_20
Specimen euxassay_014151_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_014151_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_21
Specimen euxassay_014151_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_014151_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014151_22
Specimen euxassay_014151_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_014151_23
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory