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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823920
Gene symbol: Clec1a
Gene name: C-type lectin domain family 1, member a
Probe: MGC clone 60749
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006533_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_006533_02
Specimen euxassay_006533_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_03
TS23: stomach Weak Regionally restricted euxassay_006533_03
Specimen euxassay_006533_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_04
TS23: stomach Weak Regionally restricted euxassay_006533_04
Specimen euxassay_006533_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_05
TS23: stomach Weak Regionally restricted euxassay_006533_05
Specimen euxassay_006533_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_06
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_06
TS23: stomach Weak Regionally restricted euxassay_006533_06
TS23: midgut Weak Regionally restricted euxassay_006533_06
Specimen euxassay_006533_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_07
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_07
TS23: stomach Weak Regionally restricted euxassay_006533_07
TS23: midgut Weak Regionally restricted euxassay_006533_07
TS23: metanephros Moderate Regionally restricted euxassay_006533_07
Specimen euxassay_006533_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_08
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_08
TS23: stomach Weak Regionally restricted euxassay_006533_08
TS23: midgut Weak Regionally restricted euxassay_006533_08
TS23: metanephros Moderate Regionally restricted euxassay_006533_08
Specimen euxassay_006533_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_09
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_09
TS23: midgut Weak Regionally restricted euxassay_006533_09
TS23: metanephros Moderate Regionally restricted euxassay_006533_09
TS23: adrenal gland Weak Regionally restricted euxassay_006533_09
Specimen euxassay_006533_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_10
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_10
TS23: midgut Weak Regionally restricted euxassay_006533_10
TS23: metanephros Moderate Regionally restricted euxassay_006533_10
TS23: adrenal gland Weak Regionally restricted euxassay_006533_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006533_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006533_10
Specimen euxassay_006533_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_11
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_11
TS23: midgut Weak Regionally restricted euxassay_006533_11
TS23: metanephros Moderate Regionally restricted euxassay_006533_11
TS23: adrenal gland Weak Regionally restricted euxassay_006533_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_006533_11
Specimen euxassay_006533_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_12
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_12
TS23: midgut Weak Regionally restricted euxassay_006533_12
Specimen euxassay_006533_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_13
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_13
TS23: midgut Weak Regionally restricted euxassay_006533_13
TS23: hindgut Weak Regionally restricted euxassay_006533_13
Specimen euxassay_006533_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_14
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_14
TS23: midgut Weak Regionally restricted euxassay_006533_14
Specimen euxassay_006533_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_15
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_006533_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006533_15
Specimen euxassay_006533_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_16
TS23: heart ventricle Moderate Regionally restricted euxassay_006533_16
TS23: midgut Weak Regionally restricted euxassay_006533_16
TS23: metanephros Moderate Regionally restricted euxassay_006533_16
Specimen euxassay_006533_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_17
TS23: midgut Weak Regionally restricted euxassay_006533_17
TS23: metanephros Moderate Regionally restricted euxassay_006533_17
TS23: adrenal gland Weak Regionally restricted euxassay_006533_17
Specimen euxassay_006533_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_18
TS23: midgut Weak Regionally restricted euxassay_006533_18
TS23: metanephros Moderate Regionally restricted euxassay_006533_18
TS23: adrenal gland Weak Regionally restricted euxassay_006533_18
Specimen euxassay_006533_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_19
TS23: midgut Weak Regionally restricted euxassay_006533_19
TS23: metanephros Moderate Regionally restricted euxassay_006533_19
TS23: adrenal gland Weak Regionally restricted euxassay_006533_19
Specimen euxassay_006533_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_20
TS23: metanephros Moderate Regionally restricted euxassay_006533_20
TS23: adrenal gland Weak Regionally restricted euxassay_006533_20
Specimen euxassay_006533_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_21
TS23: metanephros Moderate Regionally restricted euxassay_006533_21
Specimen euxassay_006533_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_22
Specimen euxassay_006533_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_23
Specimen euxassay_006533_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_006533_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory