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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823900
Gene symbol: Clcn3
Gene name: chloride channel, voltage-sensitive 3
Probe: T38195
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012819_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_03
TS23: facial ganglion Weak Regionally restricted euxassay_012819_03
Specimen euxassay_012819_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_04
TS23: facial ganglion Weak Regionally restricted euxassay_012819_04
Specimen euxassay_012819_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012819_05
TS23: facial ganglion Moderate Regionally restricted euxassay_012819_05
Specimen euxassay_012819_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_06
Specimen euxassay_012819_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012819_07
Specimen euxassay_012819_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_08
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012819_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_08
Specimen euxassay_012819_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_09
Specimen euxassay_012819_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_10
TS23: ventral grey horn Weak Regionally restricted euxassay_012819_10
Specimen euxassay_012819_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_11
TS23: ventral grey horn Weak Regionally restricted euxassay_012819_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012819_11
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012819_11
Specimen euxassay_012819_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_012819_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012819_12
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_12
Specimen euxassay_012819_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012819_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012819_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_13
Specimen euxassay_012819_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_012819_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_14
Specimen euxassay_012819_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_15
TS23: ventral grey horn Weak Regionally restricted euxassay_012819_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_15
Specimen euxassay_012819_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_16
Specimen euxassay_012819_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012819_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012819_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012819_17
Specimen euxassay_012819_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012819_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012819_18
Specimen euxassay_012819_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_19
TS23: facial ganglion Weak Regionally restricted euxassay_012819_19
Specimen euxassay_012819_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_20
TS23: facial ganglion Weak Regionally restricted euxassay_012819_20
Specimen euxassay_012819_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012819_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory