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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823898
Gene symbol: Clcn1
Gene name: chloride channel, voltage-sensitive 1
Probe: T45057
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_016591_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_03
Specimen euxassay_016591_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_04
Specimen euxassay_016591_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_06
Specimen euxassay_016591_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016591_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016591_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016591_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_016591_13
Specimen euxassay_016591_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016591_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016591_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016591_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_016591_14
Specimen euxassay_016591_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016591_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016591_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016591_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016591_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_016591_15
Specimen euxassay_016591_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016591_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016591_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016591_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016591_16
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_016591_16
Specimen euxassay_016591_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016591_17
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016591_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016591_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016591_17
Specimen euxassay_016591_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016591_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016591_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016591_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016591_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_18
Specimen euxassay_016591_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016591_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016591_19
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016591_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_19
Specimen euxassay_016591_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016591_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_016591_20
Specimen euxassay_016591_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_21
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016591_21
Specimen euxassay_016591_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_22
Specimen euxassay_016591_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016591_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory