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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823892
Gene symbol: Clca3a1
Gene name: chloride channel accessory 3A1
Probe: T30074
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011993_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_01
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_01
TS23: rib Moderate Regionally restricted euxassay_011993_01
TS23: humerus Moderate Regionally restricted euxassay_011993_01
TS23: scapula Moderate Regionally restricted euxassay_011993_01
TS23: radius Moderate Regionally restricted euxassay_011993_01
Specimen euxassay_011993_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_02
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_02
TS23: rib Moderate Regionally restricted euxassay_011993_02
TS23: humerus Moderate Regionally restricted euxassay_011993_02
TS23: radius Moderate Regionally restricted euxassay_011993_02
TS23: ulna Moderate Regionally restricted euxassay_011993_02
Specimen euxassay_011993_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_03
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_03
TS23: rib Moderate Regionally restricted euxassay_011993_03
TS23: humerus Moderate Regionally restricted euxassay_011993_03
TS23: femur Moderate Regionally restricted euxassay_011993_03
TS23: tibia Moderate Regionally restricted euxassay_011993_03
TS23: fibula Moderate Regionally restricted euxassay_011993_03
TS23: urinary system Strong Regionally restricted euxassay_011993_03
TS23: mesonephros Present euxassay_011993_03
Specimen euxassay_011993_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_04
TS23: rib Moderate Regionally restricted euxassay_011993_04
TS23: humerus Moderate Regionally restricted euxassay_011993_04
TS23: fibula Moderate Regionally restricted euxassay_011993_04
TS23: tibia Moderate Regionally restricted euxassay_011993_04
TS23: femur Moderate Regionally restricted euxassay_011993_04
TS23: urinary system Strong Regionally restricted euxassay_011993_04
TS23: mesonephros Present euxassay_011993_04
Specimen euxassay_011993_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_05
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_05
TS23: rib Moderate Regionally restricted euxassay_011993_05
TS23: fibula Moderate Regionally restricted euxassay_011993_05
TS23: tibia Moderate Regionally restricted euxassay_011993_05
TS23: testis Strong Regionally restricted euxassay_011993_05
TS23: urinary system Strong Regionally restricted euxassay_011993_05
TS23: mesonephros Present euxassay_011993_05
Specimen euxassay_011993_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: otic capsule Moderate Regionally restricted euxassay_011993_06
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_06
TS23: rib Moderate Regionally restricted euxassay_011993_06
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_06
TS23: femur Moderate Regionally restricted euxassay_011993_06
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_011993_06
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_011993_06
TS23: testis Strong Regionally restricted euxassay_011993_06
TS23: urinary system Strong Regionally restricted euxassay_011993_06
TS23: mesonephros Present euxassay_011993_06
Specimen euxassay_011993_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_07
TS23: otic capsule Moderate Regionally restricted euxassay_011993_07
TS23: rib Moderate Regionally restricted euxassay_011993_07
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_07
TS23: femur Moderate Regionally restricted euxassay_011993_07
TS23: testis Strong Regionally restricted euxassay_011993_07
TS23: urinary system Strong Regionally restricted euxassay_011993_07
TS23: mesonephros Present euxassay_011993_07
Specimen euxassay_011993_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_08
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_08
TS23: otic capsule Moderate Regionally restricted euxassay_011993_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_08
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_08
TS23: rib Moderate Regionally restricted euxassay_011993_08
TS23: femur Moderate Regionally restricted euxassay_011993_08
TS23: aorta Strong Regionally restricted euxassay_011993_08
Specimen euxassay_011993_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_09
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_09
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_09
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_09
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_011993_09
TS23: aorta Strong Regionally restricted euxassay_011993_09
Specimen euxassay_011993_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_10
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_10
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_10
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_10
TS23: aorta Strong Regionally restricted euxassay_011993_10
Specimen euxassay_011993_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_11
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_11
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_11
TS23: bladder Strong Regionally restricted euxassay_011993_11
TS23: aorta Strong Regionally restricted euxassay_011993_11
Specimen euxassay_011993_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_12
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_12
TS23: naris Moderate Regionally restricted euxassay_011993_12
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_12
TS23: bladder Strong Regionally restricted euxassay_011993_12
Specimen euxassay_011993_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_13
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_13
TS23: naris Moderate Regionally restricted euxassay_011993_13
TS23: nasal septum Moderate Regionally restricted euxassay_011993_13
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_13
TS23: bladder Strong Regionally restricted euxassay_011993_13
Specimen euxassay_011993_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_14
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_14
TS23: nasal septum Moderate Regionally restricted euxassay_011993_14
TS23: axial skeleton Moderate Regionally restricted euxassay_011993_14
TS23: bladder Strong Regionally restricted euxassay_011993_14
Specimen euxassay_011993_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: otic capsule Moderate Regionally restricted euxassay_011993_15
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_15
TS23: basisphenoid bone Moderate Regionally restricted euxassay_011993_15
TS23: naris Moderate Regionally restricted euxassay_011993_15
TS23: rib Moderate Regionally restricted euxassay_011993_15
Specimen euxassay_011993_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_16
TS23: otic capsule Moderate Regionally restricted euxassay_011993_16
TS23: naris Moderate Regionally restricted euxassay_011993_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_16
TS23: rib Moderate Regionally restricted euxassay_011993_16
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_011993_16
Specimen euxassay_011993_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_17
TS23: rib Moderate Regionally restricted euxassay_011993_17
TS23: femur Moderate Regionally restricted euxassay_011993_17
TS23: testis Strong Regionally restricted euxassay_011993_17
Specimen euxassay_011993_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_18
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_18
TS23: rib Moderate Regionally restricted euxassay_011993_18
TS23: femur Moderate Regionally restricted euxassay_011993_18
TS23: testis Strong Regionally restricted euxassay_011993_18
Specimen euxassay_011993_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_19
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_19
TS23: rib Moderate Regionally restricted euxassay_011993_19
TS23: humerus Moderate Regionally restricted euxassay_011993_19
TS23: scapula Moderate Regionally restricted euxassay_011993_19
TS23: femur Moderate Regionally restricted euxassay_011993_19
TS23: testis Strong Regionally restricted euxassay_011993_19
Specimen euxassay_011993_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_20
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_011993_20
TS23: rib Moderate Regionally restricted euxassay_011993_20
TS23: humerus Moderate Regionally restricted euxassay_011993_20
TS23: femur Moderate Regionally restricted euxassay_011993_20
Specimen euxassay_011993_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_21
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_21
TS23: rib Moderate Regionally restricted euxassay_011993_21
TS23: humerus Moderate Regionally restricted euxassay_011993_21
TS23: femur Moderate Regionally restricted euxassay_011993_21
Specimen euxassay_011993_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_22
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_22
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_22
TS23: humerus Moderate Regionally restricted euxassay_011993_22
TS23: femur Moderate Regionally restricted euxassay_011993_22
Specimen euxassay_011993_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_011993_23
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_011993_23
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011993_23
TS23: humerus Moderate Regionally restricted euxassay_011993_23
TS23: femur Moderate Regionally restricted euxassay_011993_23
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_011993_23
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_011993_23
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_011993_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory