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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823867
Gene symbol: Chst15
Gene name: carbohydrate sulfotransferase 15
Probe: MGC clone 28686
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004543_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_004543_01
Specimen euxassay_004543_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_004543_02 periosteum
TS23: stomach Moderate Regionally restricted euxassay_004543_02 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_02
TS23: neural retina Moderate Regionally restricted euxassay_004543_02
Specimen euxassay_004543_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_004543_03 periosteum
TS23: mandible Moderate Regionally restricted euxassay_004543_03
TS23: stomach Moderate Regionally restricted euxassay_004543_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_004543_03
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_004543_03
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_004543_03
TS23: neural retina Moderate Regionally restricted euxassay_004543_03
Specimen euxassay_004543_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_004543_04 periosteum
TS23: mandible Moderate Regionally restricted euxassay_004543_04
TS23: stomach Moderate Regionally restricted euxassay_004543_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_04
TS23: facial ganglion Moderate Regionally restricted euxassay_004543_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_004543_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_004543_04
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_004543_04
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_004543_04
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_004543_04
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_004543_04
Specimen euxassay_004543_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: maxilla Moderate Regionally restricted euxassay_004543_05
TS23: mandible Moderate Regionally restricted euxassay_004543_05
TS23: stomach Moderate Regionally restricted euxassay_004543_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004543_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_004543_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_004543_05
Specimen euxassay_004543_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004543_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_004543_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_004543_06
TS23: maxilla Moderate Regionally restricted euxassay_004543_06
TS23: stomach Moderate Regionally restricted euxassay_004543_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_06
TS23: midgut loop Moderate Regionally restricted euxassay_004543_06 smooth muscle
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_004543_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_004543_06
Specimen euxassay_004543_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_004543_07 periosteum
TS23: mandible Moderate Regionally restricted euxassay_004543_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_004543_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_004543_07
TS23: maxilla Moderate Regionally restricted euxassay_004543_07
TS23: midgut loop Moderate Regionally restricted euxassay_004543_07 smooth muscle
TS23: stomach Moderate Regionally restricted euxassay_004543_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004543_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_004543_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_004543_07
Specimen euxassay_004543_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_004543_08
TS23: maxilla Moderate Regionally restricted euxassay_004543_08
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004543_08
TS23: mandible Moderate Regionally restricted euxassay_004543_08
TS23: stomach Moderate Regionally restricted euxassay_004543_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_08
TS23: midgut loop Moderate Regionally restricted euxassay_004543_08 smooth muscle
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004543_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_08
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_08
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004543_08
Specimen euxassay_004543_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004543_09
TS23: upper jaw incisor Moderate Regionally restricted euxassay_004543_09
TS23: clavicle Moderate Regionally restricted euxassay_004543_09
TS23: stomach Moderate Regionally restricted euxassay_004543_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_09
TS23: midgut loop Moderate Regionally restricted euxassay_004543_09 smooth muscle
TS23: vagus ganglion Moderate Regionally restricted euxassay_004543_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_09
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_09
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004543_09
TS23: pons mantle layer Strong Regionally restricted euxassay_004543_09 trigeminal motor nucleus
Specimen euxassay_004543_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: clavicle Moderate Regionally restricted euxassay_004543_10
TS23: stomach Moderate Regionally restricted euxassay_004543_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_10
TS23: midgut loop Moderate Regionally restricted euxassay_004543_10 smooth muscle
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004543_10
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004543_10 facial motor nucleus
TS23: dorsal root ganglion Weak Regionally restricted euxassay_004543_10
Specimen euxassay_004543_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004543_11
TS23: stomach Moderate Regionally restricted euxassay_004543_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_11
TS23: midgut loop Moderate Regionally restricted euxassay_004543_11 smooth muscle
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004543_11
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_11
TS23: bladder fundus Moderate Regionally restricted euxassay_004543_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_004543_11
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_004543_11
Specimen euxassay_004543_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_004543_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004543_12
TS23: rectum Moderate Regionally restricted euxassay_004543_12 smooth muscle
TS23: hindgut Moderate Regionally restricted euxassay_004543_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_12
TS23: midgut loop Moderate Regionally restricted euxassay_004543_12 smooth muscle
TS23: midgut Moderate Regionally restricted euxassay_004543_12 smooth muscle
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004543_12
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_12
TS23: bladder fundus Moderate Regionally restricted euxassay_004543_12
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_004543_12
Specimen euxassay_004543_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_004543_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004543_13
TS23: rectum Moderate Regionally restricted euxassay_004543_13 smooth muscle
TS23: hindgut Moderate Regionally restricted euxassay_004543_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_13
TS23: midgut Moderate Regionally restricted euxassay_004543_13 smooth muscle
TS23: midgut loop Moderate Regionally restricted euxassay_004543_13 smooth muscle
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004543_13
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004543_13
TS23: bladder fundus Moderate Regionally restricted euxassay_004543_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_004543_13
Specimen euxassay_004543_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_004543_14 smooth muscle
TS23: hindgut Moderate Regionally restricted euxassay_004543_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004543_14
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004543_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_004543_14 oculomotor nerve nucleus
TS23: oculomotor nerve Moderate Regionally restricted euxassay_004543_14
TS23: trochlear nerve Moderate Regionally restricted euxassay_004543_14
TS23: bladder Moderate Regionally restricted euxassay_004543_14
TS23: bladder fundus Moderate Regionally restricted euxassay_004543_14
Specimen euxassay_004543_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004543_15
TS23: maxilla Moderate Regionally restricted euxassay_004543_15
TS23: hindgut Moderate Regionally restricted euxassay_004543_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_15
TS23: midgut Moderate Regionally restricted euxassay_004543_15 smooth muscle
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004543_15
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_15
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004543_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004543_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_004543_15 oculomotor nerve nucleus
Specimen euxassay_004543_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: upper jaw molar Moderate Regionally restricted euxassay_004543_16
TS23: maxilla Moderate Regionally restricted euxassay_004543_16
TS23: lower jaw molar Moderate Regionally restricted euxassay_004543_16
TS23: mandible Moderate Regionally restricted euxassay_004543_16
TS23: midgut Moderate Regionally restricted euxassay_004543_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004543_16
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004543_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_004543_16 oculomotor nerve nucleus
TS23: oculomotor nerve Moderate Regionally restricted euxassay_004543_16
Specimen euxassay_004543_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004543_17
TS23: lower jaw molar Moderate Regionally restricted euxassay_004543_17
TS23: upper jaw molar Moderate Regionally restricted euxassay_004543_17
TS23: maxilla Moderate Regionally restricted euxassay_004543_17
TS23: midgut Moderate Regionally restricted euxassay_004543_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_17
TS23: clavicle Moderate Regionally restricted euxassay_004543_17 periosteum
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_17
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004543_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004543_17 facial motor nucleus
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_004543_17 oculomotor nerve nucleus and trochlear nerve nucleus
TS23: trochlear nerve Moderate Regionally restricted euxassay_004543_17
TS23: oculomotor nerve Moderate Regionally restricted euxassay_004543_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_004543_17
Specimen euxassay_004543_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004543_18
TS23: maxilla Moderate Regionally restricted euxassay_004543_18
TS23: midgut Moderate Regionally restricted euxassay_004543_18 smooth muscle
TS23: smooth muscle tissue Present euxassay_004543_18
TS23: clavicle Moderate Regionally restricted euxassay_004543_18 periosteum
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_004543_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_18
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_18
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_004543_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004543_18 facial motor nucleus
TS23: dorsal root ganglion Weak Regionally restricted euxassay_004543_18
Specimen euxassay_004543_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_004543_19 periosteum
TS23: mandible Moderate Regionally restricted euxassay_004543_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004543_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004543_19
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_19
TS23: pons mantle layer Strong Regionally restricted euxassay_004543_19 trigeminal motor nucleus
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_004543_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_004543_19
Specimen euxassay_004543_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_004543_20 periosteum
TS23: mandible Moderate Regionally restricted euxassay_004543_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004543_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_20
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_20
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004543_20
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_004543_20
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_004543_20
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_004543_20
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_004543_20
TS23: dorsal root ganglion Weak Regionally restricted euxassay_004543_20
Specimen euxassay_004543_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_004543_21 periosteum
TS23: mandible Moderate Regionally restricted euxassay_004543_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004543_21
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_21
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004543_21
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_21
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_004543_21
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_004543_21
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_004543_21
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_004543_21
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_004543_21
TS23: neural retina Moderate Regionally restricted euxassay_004543_21
Specimen euxassay_004543_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_004543_22 periosteum
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004543_22
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004543_22
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_22
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_004543_22
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_004543_22
TS23: neural retina Moderate Regionally restricted euxassay_004543_22
Specimen euxassay_004543_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_004543_23 periosteum
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004543_23
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004543_23
TS23: neural retina Moderate Regionally restricted euxassay_004543_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory