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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823859
Gene symbol: Chrna6
Gene name: cholinergic receptor, nicotinic, alpha polypeptide 6
Probe: MGC clone 25239
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001125_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Weak Regionally restricted euxassay_001125_09
Specimen euxassay_001125_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Weak Regionally restricted euxassay_001125_10
Specimen euxassay_001125_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_11
TS23: midbrain floor plate Moderate Regionally restricted euxassay_001125_11
Specimen euxassay_001125_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_12
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_001125_12 oculomotor nerve nucleus
Specimen euxassay_001125_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_13
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_001125_13 oculomotor nerve nucleus
Specimen euxassay_001125_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_001125_14 oculomotor nerve nucleus
Specimen euxassay_001125_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_15
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_001125_15 oculomotor nerve nucleus
Specimen euxassay_001125_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_16
TS23: midbrain floor plate Moderate Regionally restricted euxassay_001125_16
Specimen euxassay_001125_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_17
Specimen euxassay_001125_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_001125_18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory