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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823839
Gene symbol: Chd5
Gene name: chromodomain helicase DNA binding protein 5
Probe: T39629
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013995_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_01
Specimen euxassay_013995_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_02
Specimen euxassay_013995_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_03
Specimen euxassay_013995_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_04
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_04
TS23: facial ganglion Strong Regionally restricted euxassay_013995_04
Specimen euxassay_013995_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_05
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_05
TS23: facial ganglion Strong Regionally restricted euxassay_013995_05
Specimen euxassay_013995_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_06
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_06
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_06
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013995_06
TS23: facial ganglion Strong Regionally restricted euxassay_013995_06
Specimen euxassay_013995_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_07
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_013995_07
Specimen euxassay_013995_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_08
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_08
TS23: vagus ganglion Strong Regionally restricted euxassay_013995_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_013995_08
Specimen euxassay_013995_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_09
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_09
Specimen euxassay_013995_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_10
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_10
Specimen euxassay_013995_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_11
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_11
Specimen euxassay_013995_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_12
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_12
Specimen euxassay_013995_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_13
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_13
Specimen euxassay_013995_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_14
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_14
Specimen euxassay_013995_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_15
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_15
Specimen euxassay_013995_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_16
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_16
Specimen euxassay_013995_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_17
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_17
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_17
Specimen euxassay_013995_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013995_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_18
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_18
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013995_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_18
TS23: vagus ganglion Strong Regionally restricted euxassay_013995_18
TS23: facial ganglion Strong Regionally restricted euxassay_013995_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_013995_18
Specimen euxassay_013995_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013995_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_19
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_19
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_19
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013995_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_013995_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013995_19
Specimen euxassay_013995_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_20
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_20
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_20
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013995_20
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013995_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_20
TS23: facial ganglion Strong Regionally restricted euxassay_013995_20
Specimen euxassay_013995_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_21
TS23: pons mantle layer Strong Regionally restricted euxassay_013995_21
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013995_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_21
TS23: facial ganglion Strong Regionally restricted euxassay_013995_21
Specimen euxassay_013995_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013995_22
Specimen euxassay_013995_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013995_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory