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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823831
Gene symbol: Cgref1
Gene name: cell growth regulator with EF hand domain 1
Probe: T31373
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012517_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_01
TS23: humerus Strong Regionally restricted euxassay_012517_01
TS23: femur Strong Regionally restricted euxassay_012517_01
Specimen euxassay_012517_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_02
TS23: rib Strong Regionally restricted euxassay_012517_02
TS23: humerus Strong Regionally restricted euxassay_012517_02
Specimen euxassay_012517_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_03
TS23: mandible Strong Regionally restricted euxassay_012517_03
TS23: maxilla Strong Regionally restricted euxassay_012517_03
TS23: rib Strong Regionally restricted euxassay_012517_03
TS23: humerus Strong Regionally restricted euxassay_012517_03
TS23: scapula Strong Regionally restricted euxassay_012517_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_03
Specimen euxassay_012517_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_04
TS23: mandible Strong Regionally restricted euxassay_012517_04
TS23: maxilla Strong Regionally restricted euxassay_012517_04
TS23: rib Strong Regionally restricted euxassay_012517_04
TS23: humerus Strong Regionally restricted euxassay_012517_04
TS23: scapula Strong Regionally restricted euxassay_012517_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_04
TS23: facial ganglion Moderate Regionally restricted euxassay_012517_04
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_04
Specimen euxassay_012517_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_05
TS23: maxilla Strong Regionally restricted euxassay_012517_05
TS23: rib Strong Regionally restricted euxassay_012517_05
TS23: clavicle Strong Regionally restricted euxassay_012517_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_05
TS23: facial ganglion Moderate Regionally restricted euxassay_012517_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_05
Specimen euxassay_012517_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_06
TS23: maxilla Strong Regionally restricted euxassay_012517_06
TS23: rib Strong Regionally restricted euxassay_012517_06
TS23: clavicle Strong Regionally restricted euxassay_012517_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_06
TS23: facial ganglion Moderate Regionally restricted euxassay_012517_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_06
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_06
Specimen euxassay_012517_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_07
TS23: maxilla Strong Regionally restricted euxassay_012517_07
TS23: rib Strong Regionally restricted euxassay_012517_07
TS23: clavicle Strong Regionally restricted euxassay_012517_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012517_07
TS23: facial ganglion Moderate Regionally restricted euxassay_012517_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_07
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_07
Specimen euxassay_012517_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_08
TS23: maxilla Strong Regionally restricted euxassay_012517_08
TS23: rib Strong Regionally restricted euxassay_012517_08
TS23: clavicle Strong Regionally restricted euxassay_012517_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_012517_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_08
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_08
Specimen euxassay_012517_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_09
TS23: maxilla Strong Regionally restricted euxassay_012517_09
TS23: clavicle Strong Regionally restricted euxassay_012517_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_09
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_09
Specimen euxassay_012517_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_10
TS23: maxilla Strong Regionally restricted euxassay_012517_10
TS23: clavicle Strong Regionally restricted euxassay_012517_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_10
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_10
TS23: heart ventricle Moderate Spotted euxassay_012517_10
Specimen euxassay_012517_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_11
TS23: maxilla Strong Regionally restricted euxassay_012517_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_11
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_11
TS23: heart ventricle Moderate Spotted euxassay_012517_11
Specimen euxassay_012517_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_12
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_12
TS23: heart ventricle Moderate Spotted euxassay_012517_12
Specimen euxassay_012517_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_13
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_13
TS23: heart ventricle Moderate Spotted euxassay_012517_13
Specimen euxassay_012517_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_14
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_14
TS23: heart ventricle Moderate Spotted euxassay_012517_14
Specimen euxassay_012517_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_15
TS23: maxilla Strong Regionally restricted euxassay_012517_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_15
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_15
TS23: heart ventricle Moderate Spotted euxassay_012517_15
Specimen euxassay_012517_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_16
TS23: maxilla Strong Regionally restricted euxassay_012517_16
TS23: femur Strong Regionally restricted euxassay_012517_16
TS23: trigeminal nerve Moderate Regionally restricted euxassay_012517_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_16
TS23: ventral grey horn Strong Regionally restricted euxassay_012517_16
TS23: heart ventricle Moderate Spotted euxassay_012517_16
Specimen euxassay_012517_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_17
TS23: maxilla Strong Regionally restricted euxassay_012517_17
TS23: clavicle Strong Regionally restricted euxassay_012517_17
TS23: femur Strong Regionally restricted euxassay_012517_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_012517_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_17
TS23: heart ventricle Moderate Spotted euxassay_012517_17
Specimen euxassay_012517_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_18
TS23: maxilla Strong Regionally restricted euxassay_012517_18
TS23: rib Strong Regionally restricted euxassay_012517_18
TS23: clavicle Strong Regionally restricted euxassay_012517_18
TS23: femur Strong Regionally restricted euxassay_012517_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012517_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_012517_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012517_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012517_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_012517_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012517_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012517_18
TS23: heart ventricle Moderate Spotted euxassay_012517_18
Specimen euxassay_012517_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012517_19
TS23: maxilla Strong Regionally restricted euxassay_012517_19
TS23: rib Strong Regionally restricted euxassay_012517_19
TS23: clavicle Strong Regionally restricted euxassay_012517_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012517_19
TS23: facial ganglion Moderate Regionally restricted euxassay_012517_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012517_19
Specimen euxassay_012517_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_20
TS23: mandible Strong Regionally restricted euxassay_012517_20
TS23: maxilla Strong Regionally restricted euxassay_012517_20
TS23: rib Strong Regionally restricted euxassay_012517_20
TS23: clavicle Strong Regionally restricted euxassay_012517_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_20
TS23: facial ganglion Moderate Regionally restricted euxassay_012517_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_20
Specimen euxassay_012517_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_21
TS23: mandible Strong Regionally restricted euxassay_012517_21
TS23: maxilla Strong Regionally restricted euxassay_012517_21
TS23: rib Strong Regionally restricted euxassay_012517_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_21
Specimen euxassay_012517_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_22
TS23: mandible Strong Regionally restricted euxassay_012517_22
TS23: rib Strong Regionally restricted euxassay_012517_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012517_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012517_22
Specimen euxassay_012517_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_23
TS23: vault of skull Strong Regionally restricted euxassay_012517_23
TS23: rib Strong Regionally restricted euxassay_012517_23
TS23: humerus Strong Regionally restricted euxassay_012517_23
TS23: scapula Strong Regionally restricted euxassay_012517_23
Specimen euxassay_012517_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vault of skull Strong Regionally restricted euxassay_012517_24
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012517_24
TS23: humerus Strong Regionally restricted euxassay_012517_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory