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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823547
Gene symbol: Arhgef4
Gene name: Rho guanine nucleotide exchange factor 4
Probe: T36082
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011915_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_01
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_01
Specimen euxassay_011915_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_02
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_02
Specimen euxassay_011915_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_03
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_03
Specimen euxassay_011915_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_04
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_04
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_04
Specimen euxassay_011915_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_05
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_05
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_05
Specimen euxassay_011915_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_06
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_06
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_06
Specimen euxassay_011915_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_07
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_07
Specimen euxassay_011915_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_08
Specimen euxassay_011915_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_09
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_011915_09
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_09
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_09
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_011915_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_09
Specimen euxassay_011915_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_10
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_011915_10
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_10
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_10
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_011915_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_10
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_011915_10
Specimen euxassay_011915_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_11
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_011915_11
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_11
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_011915_11
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_011915_11
Specimen euxassay_011915_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_12
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_011915_12
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_12
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_011915_12
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_011915_12
Specimen euxassay_011915_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_13
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_13
Specimen euxassay_011915_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_14
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_011915_14
Specimen euxassay_011915_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_15
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_15
Specimen euxassay_011915_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_011915_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_16
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_16
Specimen euxassay_011915_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_17
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_17
Specimen euxassay_011915_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_18
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_18
Specimen euxassay_011915_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_011915_19
TS23: pons ventricular layer Strong Regionally restricted euxassay_011915_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory