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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823425
Gene symbol: Paral1
Gene name: PPARG activating RBM14 associated lncRNA 1
Probe: IMAGE clone 1547858
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007841_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forearm rest of mesenchyme Moderate Regionally restricted euxassay_007841_01
TS23: hand mesenchyme Moderate Regionally restricted euxassay_007841_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_01
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_01
Specimen euxassay_007841_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_02
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_007841_02
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_007841_02
TS23: hand mesenchyme Moderate Regionally restricted euxassay_007841_02
TS23: forearm rest of mesenchyme Moderate Regionally restricted euxassay_007841_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_02
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_02
Specimen euxassay_007841_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_03
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_007841_03
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_007841_03
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_007841_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_03
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_03
Specimen euxassay_007841_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_04
TS23: lung Moderate Regionally restricted euxassay_007841_04
TS23: metanephros Moderate Regionally restricted euxassay_007841_04
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007841_04
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_007841_04
TS23: hand mesenchyme Moderate Regionally restricted euxassay_007841_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_04
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_04
Specimen euxassay_007841_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_05
TS23: lung Moderate Regionally restricted euxassay_007841_05
TS23: testis Moderate Regionally restricted euxassay_007841_05
TS23: metanephros Moderate Regionally restricted euxassay_007841_05
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_007841_05
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_007841_05
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007841_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_05
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_05
Specimen euxassay_007841_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_06
TS23: lung Moderate Regionally restricted euxassay_007841_06
TS23: testis Moderate Regionally restricted euxassay_007841_06
TS23: metanephros Moderate Regionally restricted euxassay_007841_06
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_007841_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_06
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_06
Specimen euxassay_007841_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_07
TS23: lung Moderate Regionally restricted euxassay_007841_07
TS23: testis Moderate Regionally restricted euxassay_007841_07
TS23: metanephros Moderate Regionally restricted euxassay_007841_07
TS23: adrenal cortex Moderate Regionally restricted euxassay_007841_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007841_07
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_007841_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_07
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_07
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_07
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_07
Specimen euxassay_007841_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_007841_08
TS23: lung Moderate Regionally restricted euxassay_007841_08
TS23: testis Moderate Regionally restricted euxassay_007841_08
TS23: metanephros Moderate Regionally restricted euxassay_007841_08
TS23: adrenal cortex Moderate Regionally restricted euxassay_007841_08
TS23: pancreas Weak Regionally restricted euxassay_007841_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007841_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_08
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_08
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_08
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_08
Specimen euxassay_007841_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_007841_09
TS23: metanephros Moderate Regionally restricted euxassay_007841_09
TS23: adrenal cortex Moderate Regionally restricted euxassay_007841_09
TS23: pancreas Weak Regionally restricted euxassay_007841_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007841_09
TS23: tongue Moderate Regionally restricted euxassay_007841_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_09
TS23: nasal septum Moderate Regionally restricted euxassay_007841_09
TS23: upper jaw incisor Moderate Regionally restricted euxassay_007841_09
TS23: tail mesenchyme Weak Regionally restricted euxassay_007841_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_007841_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_007841_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_007841_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007841_09
Specimen euxassay_007841_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_007841_10
TS23: pancreas Weak Regionally restricted euxassay_007841_10
TS23: tongue Moderate Regionally restricted euxassay_007841_10
TS23: bladder Weak Regionally restricted euxassay_007841_10
TS23: tail mesenchyme Weak Regionally restricted euxassay_007841_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_007841_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_10
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007841_10
Specimen euxassay_007841_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_11
TS23: tongue Moderate Regionally restricted euxassay_007841_11
TS23: nasal septum Moderate Regionally restricted euxassay_007841_11
TS23: bladder Weak Regionally restricted euxassay_007841_11
TS23: tail mesenchyme Moderate Regionally restricted euxassay_007841_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_007841_11
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_11
TS23: dorsal grey horn Moderate Regionally restricted euxassay_007841_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007841_11
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_007841_11
Specimen euxassay_007841_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_12
TS23: tongue Moderate Regionally restricted euxassay_007841_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_12
TS23: bladder Weak Regionally restricted euxassay_007841_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_007841_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_007841_12
TS23: tail mesenchyme Moderate Regionally restricted euxassay_007841_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_007841_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_12
TS23: dorsal grey horn Moderate Regionally restricted euxassay_007841_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007841_12
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_007841_12
Specimen euxassay_007841_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_13
TS23: metanephros Moderate Regionally restricted euxassay_007841_13
TS23: tongue Moderate Regionally restricted euxassay_007841_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_007841_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_13
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_13
TS23: dorsal grey horn Moderate Regionally restricted euxassay_007841_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007841_13
Specimen euxassay_007841_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_14
TS23: metanephros Moderate Regionally restricted euxassay_007841_14
TS23: adrenal cortex Moderate Regionally restricted euxassay_007841_14
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007841_14
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007841_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_007841_14
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_007841_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_007841_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_007841_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007841_14
TS23: dorsal grey horn Moderate Regionally restricted euxassay_007841_14
Specimen euxassay_007841_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_007841_15
TS23: testis Moderate Regionally restricted euxassay_007841_15
TS23: metanephros Moderate Regionally restricted euxassay_007841_15
TS23: adrenal cortex Moderate Regionally restricted euxassay_007841_15
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007841_15
TS23: hindlimb digit 5 mesenchyme Strong Regionally restricted euxassay_007841_15
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_007841_15
TS23: lower jaw molar Moderate Regionally restricted euxassay_007841_15
TS23: upper jaw molar Moderate Regionally restricted euxassay_007841_15
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_15
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007841_15
Specimen euxassay_007841_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_007841_16
TS23: testis Moderate Regionally restricted euxassay_007841_16
TS23: metanephros Moderate Regionally restricted euxassay_007841_16
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_007841_16
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_007841_16
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_007841_16
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_16
TS23: pons mantle layer Strong Regionally restricted euxassay_007841_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007841_16
Specimen euxassay_007841_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_007841_17
TS23: testis Moderate Regionally restricted euxassay_007841_17
TS23: metanephros Moderate Regionally restricted euxassay_007841_17
TS23: hindlimb digit 1 mesenchyme Strong Regionally restricted euxassay_007841_17
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_007841_17
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_007841_17
TS23: hand mesenchyme Moderate Regionally restricted euxassay_007841_17
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_17
Specimen euxassay_007841_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_18
TS23: testis Weak Regionally restricted euxassay_007841_18
TS23: hindlimb digit 3 mesenchyme Weak Regionally restricted euxassay_007841_18
TS23: hindlimb digit 2 mesenchyme Weak Regionally restricted euxassay_007841_18
TS23: hindlimb digit 1 mesenchyme Weak Regionally restricted euxassay_007841_18
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_007841_18
Specimen euxassay_007841_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_19
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_19
Specimen euxassay_007841_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_007841_20
TS23: hand mesenchyme Weak Regionally restricted euxassay_007841_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_20
TS23: telencephalon meninges Strong Regionally restricted euxassay_007841_20
Specimen euxassay_007841_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand mesenchyme Moderate Regionally restricted euxassay_007841_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007841_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory