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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823372
Gene symbol: B3galt2
Gene name: UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
Probe: T30377
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011551_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_01
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_01
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_01
TS23: neural retina Moderate Regionally restricted euxassay_011551_01
Specimen euxassay_011551_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_02
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_011551_02
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_02
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_02
TS23: neural retina Moderate Regionally restricted euxassay_011551_02
Specimen euxassay_011551_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_03
TS23: diaphragm Weak Regionally restricted euxassay_011551_03
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_011551_03
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_03
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_03
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011551_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_011551_03
Specimen euxassay_011551_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_04
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_04
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_04
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_04
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_04
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011551_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_04
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_04
Specimen euxassay_011551_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_05
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_05
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_05
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_05
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_05
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_05
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_05
Specimen euxassay_011551_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_06
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_06
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_06
TS23: foot Weak Regionally restricted euxassay_011551_06
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_06
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_06
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_06
Specimen euxassay_011551_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_07
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_07
TS23: foot Weak Regionally restricted euxassay_011551_07
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_07
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_07
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_07
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_07
Specimen euxassay_011551_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_08
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_08
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_08
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011551_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_08
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_08
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_08
TS23: axial skeleton Weak Regionally restricted euxassay_011551_08
Specimen euxassay_011551_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_09
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_011551_09
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_09
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_09
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011551_09
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_09
TS23: axial skeleton Weak Regionally restricted euxassay_011551_09
Specimen euxassay_011551_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_10
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_10
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011551_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_011551_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011551_10
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_10
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_10
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011551_10
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_10
TS23: axial skeleton Weak Regionally restricted euxassay_011551_10
Specimen euxassay_011551_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_11
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_11
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011551_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_11
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_11
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_11
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_11
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011551_11
TS23: tongue muscle Weak Regionally restricted euxassay_011551_11
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_11
TS23: axial skeleton Weak Regionally restricted euxassay_011551_11
Specimen euxassay_011551_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_12
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_12
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_12
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_12
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_12
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011551_12
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011551_12
TS23: tongue muscle Weak Regionally restricted euxassay_011551_12
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_12
Specimen euxassay_011551_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_13
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_13
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_13
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_13
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_13
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_13
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011551_13
TS23: tongue muscle Weak Regionally restricted euxassay_011551_13
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_13
TS23: axial skeleton Weak Regionally restricted euxassay_011551_13
Specimen euxassay_011551_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_14
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_14
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011551_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011551_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_14
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_14
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_14
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_14
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011551_14
TS23: tongue muscle Weak Regionally restricted euxassay_011551_14
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_14
TS23: axial skeleton Weak Regionally restricted euxassay_011551_14
Specimen euxassay_011551_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_15
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_15
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011551_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011551_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_15
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_15
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_15
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_011551_15
TS23: axial skeleton Weak Regionally restricted euxassay_011551_15
Specimen euxassay_011551_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_16
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_16
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011551_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011551_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_16
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_16
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011551_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011551_16
TS23: axial skeleton Weak Regionally restricted euxassay_011551_16
Specimen euxassay_011551_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_17
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_17
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011551_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_17
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_17
Specimen euxassay_011551_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_18
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_18
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_18
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011551_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011551_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011551_18
TS23: pons mantle layer Weak Regionally restricted euxassay_011551_18
Specimen euxassay_011551_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_19
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_19
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_19
TS23: foot Weak Regionally restricted euxassay_011551_19
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_19
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011551_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_19
Specimen euxassay_011551_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_20
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_20
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_20
TS23: foot Weak Regionally restricted euxassay_011551_20
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_20
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_20
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011551_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_011551_20
Specimen euxassay_011551_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_21
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_21
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_21
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_21
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011551_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_21
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_21
Specimen euxassay_011551_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_22
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_22
TS23: upper leg muscle Weak Regionally restricted euxassay_011551_22
TS23: upper arm muscle Weak Regionally restricted euxassay_011551_22
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_22
TS23: neural retina Moderate Regionally restricted euxassay_011551_22
Specimen euxassay_011551_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Weak Regionally restricted euxassay_011551_23
TS23: vertebral axis musculature Weak Regionally restricted euxassay_011551_23
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_011551_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011551_23
TS23: neural retina Moderate Regionally restricted euxassay_011551_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory