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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823354
Gene symbol: Ccz1
Gene name: CCZ1 vacuolar protein trafficking and biogenesis associated
Probe: IMAGE clone 2192844
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008787_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_01
TS23: shoulder rest of mesenchyme Strong Regionally restricted euxassay_008787_01
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_01
TS23: forebrain Moderate Single cells euxassay_008787_01
Specimen euxassay_008787_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_02
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_02
TS23: diaphragm Strong Regionally restricted euxassay_008787_02
TS23: shoulder rest of mesenchyme Strong Regionally restricted euxassay_008787_02
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_02
TS23: hand mesenchyme Strong Regionally restricted euxassay_008787_02
TS23: hindbrain Moderate Single cells euxassay_008787_02
TS23: forebrain Moderate Single cells euxassay_008787_02
Specimen euxassay_008787_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_03
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_03
TS23: diaphragm Strong Regionally restricted euxassay_008787_03
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_03
TS23: shoulder rest of mesenchyme Strong Regionally restricted euxassay_008787_03
TS23: hand mesenchyme Strong Regionally restricted euxassay_008787_03
TS23: forebrain Moderate Single cells euxassay_008787_03
TS23: hindbrain Moderate Single cells euxassay_008787_03
TS23: midbrain Moderate Single cells euxassay_008787_03
Specimen euxassay_008787_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_04
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_04
TS23: diaphragm Strong Regionally restricted euxassay_008787_04
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_04
TS23: hand mesenchyme Strong Regionally restricted euxassay_008787_04
TS23: midbrain Moderate Single cells euxassay_008787_04
TS23: hindbrain Moderate Single cells euxassay_008787_04
TS23: forebrain Moderate Single cells euxassay_008787_04
Specimen euxassay_008787_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_05
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_05
TS23: diaphragm Strong Regionally restricted euxassay_008787_05
TS23: hand mesenchyme Strong Regionally restricted euxassay_008787_05
TS23: spinal cord Moderate Single cells euxassay_008787_05
TS23: midbrain Moderate Single cells euxassay_008787_05
TS23: hindbrain Moderate Single cells euxassay_008787_05
TS23: forebrain Moderate Single cells euxassay_008787_05
Specimen euxassay_008787_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_06
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_06
TS23: upper jaw molar Strong Regionally restricted euxassay_008787_06
TS23: lower jaw molar Strong Regionally restricted euxassay_008787_06
TS23: diaphragm Strong Regionally restricted euxassay_008787_06
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_06
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_008787_06
TS23: spinal cord Moderate Single cells euxassay_008787_06
TS23: midbrain Moderate Single cells euxassay_008787_06
TS23: hindbrain Moderate Single cells euxassay_008787_06
TS23: forebrain Moderate Single cells euxassay_008787_06
Specimen euxassay_008787_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_07
TS23: lower jaw molar Strong Regionally restricted euxassay_008787_07
TS23: upper jaw molar Strong Regionally restricted euxassay_008787_07
TS23: diaphragm Strong Regionally restricted euxassay_008787_07
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_07
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_008787_07
TS23: spinal cord Moderate Single cells euxassay_008787_07
TS23: hindbrain Moderate Single cells euxassay_008787_07
TS23: midbrain Moderate Single cells euxassay_008787_07
TS23: forebrain Moderate Single cells euxassay_008787_07
TS23: adrenal gland Moderate Regionally restricted euxassay_008787_07
TS23: metanephros Moderate Regionally restricted euxassay_008787_07
Specimen euxassay_008787_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_08
TS23: diaphragm Strong Regionally restricted euxassay_008787_08
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_08
TS23: foot mesenchyme Strong Regionally restricted euxassay_008787_08
TS23: spinal cord Moderate Single cells euxassay_008787_08
TS23: midbrain Moderate Single cells euxassay_008787_08
TS23: hindbrain Moderate Single cells euxassay_008787_08
TS23: forebrain Moderate Single cells euxassay_008787_08
TS23: adrenal gland Moderate Regionally restricted euxassay_008787_08
TS23: metanephros Moderate Regionally restricted euxassay_008787_08
Specimen euxassay_008787_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_09
TS23: tongue muscle Strong Regionally restricted euxassay_008787_09
TS23: diaphragm Strong Regionally restricted euxassay_008787_09
TS23: foot mesenchyme Strong Regionally restricted euxassay_008787_09
TS23: spinal cord Moderate Single cells euxassay_008787_09
TS23: midbrain Moderate Single cells euxassay_008787_09
TS23: hindbrain Moderate Single cells euxassay_008787_09
TS23: forebrain Moderate Single cells euxassay_008787_09
TS23: metanephros Moderate Regionally restricted euxassay_008787_09
Specimen euxassay_008787_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_10
TS23: lower jaw incisor Strong Regionally restricted euxassay_008787_10
TS23: upper jaw incisor Strong Regionally restricted euxassay_008787_10
TS23: tongue muscle Strong Regionally restricted euxassay_008787_10
TS23: diaphragm Strong Regionally restricted euxassay_008787_10
TS23: foot mesenchyme Strong Regionally restricted euxassay_008787_10
TS23: spinal cord Moderate Single cells euxassay_008787_10
TS23: midbrain Moderate Single cells euxassay_008787_10
TS23: forebrain Moderate Single cells euxassay_008787_10
TS23: hindbrain Moderate Single cells euxassay_008787_10
Specimen euxassay_008787_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_008787_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_008787_11
TS23: tongue muscle Strong Regionally restricted euxassay_008787_11
TS23: spinal cord Moderate Single cells euxassay_008787_11
TS23: midbrain Moderate Single cells euxassay_008787_11
TS23: hindbrain Moderate Single cells euxassay_008787_11
TS23: forebrain Moderate Single cells euxassay_008787_11
Specimen euxassay_008787_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_12
TS23: tongue muscle Strong Regionally restricted euxassay_008787_12
TS23: midbrain Moderate Single cells euxassay_008787_12
TS23: hindbrain Moderate Single cells euxassay_008787_12
TS23: forebrain Moderate Single cells euxassay_008787_12
TS23: spinal cord Moderate Single cells euxassay_008787_12
Specimen euxassay_008787_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_13
TS23: tongue muscle Strong Regionally restricted euxassay_008787_13
TS23: midbrain Moderate Single cells euxassay_008787_13
TS23: hindbrain Moderate Single cells euxassay_008787_13
TS23: forebrain Moderate Single cells euxassay_008787_13
Specimen euxassay_008787_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_14
TS23: upper jaw incisor Strong Regionally restricted euxassay_008787_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_008787_14
TS23: tongue muscle Strong Regionally restricted euxassay_008787_14
TS23: diaphragm Strong Regionally restricted euxassay_008787_14
TS23: midbrain Moderate Single cells euxassay_008787_14
TS23: hindbrain Moderate Single cells euxassay_008787_14
TS23: forebrain Moderate Single cells euxassay_008787_14
TS23: adrenal gland Moderate Regionally restricted euxassay_008787_14
TS23: metanephros Moderate Regionally restricted euxassay_008787_14
Specimen euxassay_008787_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_008787_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_008787_15
TS23: tongue muscle Strong Regionally restricted euxassay_008787_15
TS23: diaphragm Strong Regionally restricted euxassay_008787_15
TS23: midbrain Moderate Single cells euxassay_008787_15
TS23: hindbrain Moderate Single cells euxassay_008787_15
TS23: forebrain Moderate Single cells euxassay_008787_15
TS23: adrenal gland Moderate Regionally restricted euxassay_008787_15
TS23: metanephros Moderate Regionally restricted euxassay_008787_15
Specimen euxassay_008787_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_16
TS23: diaphragm Strong Regionally restricted euxassay_008787_16
TS23: forebrain Moderate Single cells euxassay_008787_16
TS23: metanephros Moderate Regionally restricted euxassay_008787_16
Specimen euxassay_008787_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_17
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_17
TS23: diaphragm Strong Regionally restricted euxassay_008787_17
TS23: forebrain Moderate Single cells euxassay_008787_17
Specimen euxassay_008787_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_18
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_18
TS23: diaphragm Strong Regionally restricted euxassay_008787_18
TS23: forebrain Moderate Single cells euxassay_008787_18
Specimen euxassay_008787_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_19
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_19
TS23: upper jaw molar Strong Regionally restricted euxassay_008787_19
TS23: lower jaw molar Strong Regionally restricted euxassay_008787_19
TS23: diaphragm Strong Regionally restricted euxassay_008787_19
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_19
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_19
TS23: forebrain Moderate Single cells euxassay_008787_19
Specimen euxassay_008787_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_20
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_20
TS23: diaphragm Strong Regionally restricted euxassay_008787_20
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_20
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_20
TS23: forebrain Moderate Single cells euxassay_008787_20
Specimen euxassay_008787_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_21
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_21
TS23: diaphragm Strong Regionally restricted euxassay_008787_21
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_21
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_21
Specimen euxassay_008787_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_008787_22
TS23: extrinsic ocular muscle Strong Regionally restricted euxassay_008787_22
TS23: shoulder rest of mesenchyme Strong Regionally restricted euxassay_008787_22
TS23: upper arm muscle Strong Regionally restricted euxassay_008787_22
TS23: upper leg muscle Strong Regionally restricted euxassay_008787_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory