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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823292
Gene symbol: Atf5
Gene name: activating transcription factor 5
Probe: T55008
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019493_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019493_01
TS23: liver Moderate Regionally restricted euxassay_019493_01
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019493_01
Specimen euxassay_019493_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019493_02
TS23: liver Moderate Regionally restricted euxassay_019493_02
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019493_02
Specimen euxassay_019493_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_019493_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_03
TS23: liver Moderate Regionally restricted euxassay_019493_03
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_03
Specimen euxassay_019493_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_019493_04
TS23: liver Weak Regionally restricted euxassay_019493_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_04
Specimen euxassay_019493_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_05
TS23: liver Moderate Regionally restricted euxassay_019493_05
TS23: lung Weak Regionally restricted euxassay_019493_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_05
Specimen euxassay_019493_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_06
TS23: vibrissa Moderate Regionally restricted euxassay_019493_06
TS23: liver Moderate Regionally restricted euxassay_019493_06
TS23: axial musculature Moderate Regionally restricted euxassay_019493_06
TS23: lung Weak Regionally restricted euxassay_019493_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_06
Specimen euxassay_019493_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_019493_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_07
TS23: vibrissa Moderate Regionally restricted euxassay_019493_07
TS23: liver Moderate Regionally restricted euxassay_019493_07
TS23: axial musculature Weak Regionally restricted euxassay_019493_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019493_07
TS23: lung Weak Regionally restricted euxassay_019493_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_07
Specimen euxassay_019493_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_019493_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_08
TS23: vibrissa Weak Regionally restricted euxassay_019493_08
TS23: liver Moderate Regionally restricted euxassay_019493_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019493_08
TS23: lung Weak Regionally restricted euxassay_019493_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_08
Specimen euxassay_019493_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_019493_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_09
TS23: liver Moderate Regionally restricted euxassay_019493_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019493_09
TS23: lung Weak Regionally restricted euxassay_019493_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_09
Specimen euxassay_019493_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_10
TS23: liver Moderate Regionally restricted euxassay_019493_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019493_10
TS23: adrenal medulla Moderate Regionally restricted euxassay_019493_10
TS23: lung Weak Regionally restricted euxassay_019493_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_10
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019493_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019493_10
Specimen euxassay_019493_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_11
TS23: liver Moderate Regionally restricted euxassay_019493_11
TS23: adrenal medulla Moderate Regionally restricted euxassay_019493_11
TS23: lung Weak Regionally restricted euxassay_019493_11
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019493_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019493_11
Specimen euxassay_019493_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_12
TS23: vomeronasal organ Strong Regionally restricted euxassay_019493_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_019493_12
TS23: liver Weak Regionally restricted euxassay_019493_12
TS23: adrenal medulla Weak Regionally restricted euxassay_019493_12
TS23: lung Weak Regionally restricted euxassay_019493_12
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019493_12
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_019493_12
Specimen euxassay_019493_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vomeronasal organ Strong Regionally restricted euxassay_019493_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_13
TS23: liver Moderate Regionally restricted euxassay_019493_13
TS23: lung Weak Regionally restricted euxassay_019493_13
Specimen euxassay_019493_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_14
TS23: liver Moderate Regionally restricted euxassay_019493_14
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019493_14
Specimen euxassay_019493_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vomeronasal organ Strong Regionally restricted euxassay_019493_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_15
TS23: liver Moderate Regionally restricted euxassay_019493_15
TS23: lung Weak Regionally restricted euxassay_019493_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_15
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019493_15
Specimen euxassay_019493_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_16
TS23: liver Weak Regionally restricted euxassay_019493_16
TS23: lung Weak Regionally restricted euxassay_019493_16
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019493_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019493_16
Specimen euxassay_019493_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_17
TS23: liver Moderate Regionally restricted euxassay_019493_17
TS23: lung Weak Regionally restricted euxassay_019493_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_17
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019493_17
Specimen euxassay_019493_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_18
TS23: liver Moderate Regionally restricted euxassay_019493_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019493_18
TS23: adrenal medulla Weak Regionally restricted euxassay_019493_18
TS23: lung Weak Regionally restricted euxassay_019493_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_18
Specimen euxassay_019493_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_019493_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019493_19
TS23: liver Moderate Regionally restricted euxassay_019493_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019493_19
TS23: adrenal medulla Moderate Regionally restricted euxassay_019493_19
TS23: lung Weak Regionally restricted euxassay_019493_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_19
Specimen euxassay_019493_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_019493_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_019493_20
TS23: vibrissa Weak Regionally restricted euxassay_019493_20
TS23: liver Moderate Regionally restricted euxassay_019493_20
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019493_20
TS23: lung Weak Regionally restricted euxassay_019493_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_20
Specimen euxassay_019493_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_21
TS23: vibrissa Moderate Regionally restricted euxassay_019493_21
TS23: liver Moderate Regionally restricted euxassay_019493_21
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019493_21
TS23: adrenal medulla Moderate Regionally restricted euxassay_019493_21
TS23: lung Weak Regionally restricted euxassay_019493_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_21
Specimen euxassay_019493_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_22
TS23: facial ganglion Moderate Regionally restricted euxassay_019493_22
TS23: vibrissa Moderate Regionally restricted euxassay_019493_22
TS23: liver Moderate Regionally restricted euxassay_019493_22
TS23: lung Weak Regionally restricted euxassay_019493_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_22
Specimen euxassay_019493_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_019493_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019493_23
TS23: facial ganglion Moderate Regionally restricted euxassay_019493_23
TS23: vibrissa Moderate Regionally restricted euxassay_019493_23
TS23: liver Moderate Regionally restricted euxassay_019493_23
TS23: axial musculature Weak Regionally restricted euxassay_019493_23
TS23: lung Weak Regionally restricted euxassay_019493_23
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019493_23
Specimen euxassay_019493_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_019493_24
TS23: liver Weak Regionally restricted euxassay_019493_24
TS23: axial musculature Weak Regionally restricted euxassay_019493_24
TS23: lung Weak Regionally restricted euxassay_019493_24
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_019493_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory