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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823283
Gene symbol: Astn2
Gene name: astrotactin 2
Probe: T38172
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012805_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_01
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_012805_01
Specimen euxassay_012805_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_02
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_012805_02
Specimen euxassay_012805_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012805_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_03
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_012805_03
Specimen euxassay_012805_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Weak Regionally restricted euxassay_012805_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012805_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_04
TS23: vibrissa Weak Regionally restricted euxassay_012805_04
Specimen euxassay_012805_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_05
TS23: facial ganglion Moderate Regionally restricted euxassay_012805_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_05
TS23: vibrissa Weak Regionally restricted euxassay_012805_05
Specimen euxassay_012805_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_06
TS23: facial ganglion Moderate Regionally restricted euxassay_012805_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_06
TS23: vibrissa Weak Regionally restricted euxassay_012805_06
Specimen euxassay_012805_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012805_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012805_07
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_07
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_07
TS23: trunk mesenchyme Weak Regionally restricted euxassay_012805_07
Specimen euxassay_012805_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012805_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012805_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_08
TS23: trunk mesenchyme Weak Regionally restricted euxassay_012805_08
Specimen euxassay_012805_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_09
TS23: trunk mesenchyme Moderate Regionally restricted euxassay_012805_09
Specimen euxassay_012805_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_10
TS23: vomeronasal organ Weak Regionally restricted euxassay_012805_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_10
Specimen euxassay_012805_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012805_11
TS23: vomeronasal organ Weak Regionally restricted euxassay_012805_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_11
Specimen euxassay_012805_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_12
Specimen euxassay_012805_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_13
TS23: trachea Weak Regionally restricted euxassay_012805_13
TS23: tail mesenchyme Weak Regionally restricted euxassay_012805_13
Specimen euxassay_012805_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_14
TS23: vomeronasal organ Weak Regionally restricted euxassay_012805_14
TS23: tail mesenchyme Weak Regionally restricted euxassay_012805_14
Specimen euxassay_012805_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_15
Specimen euxassay_012805_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_16
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_16
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_012805_16
TS23: pons mantle layer Weak Regionally restricted euxassay_012805_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012805_16
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012805_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_16
Specimen euxassay_012805_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012805_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012805_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_012805_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012805_17
TS23: tail mesenchyme Weak Regionally restricted euxassay_012805_17
Specimen euxassay_012805_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012805_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012805_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_18
TS23: vibrissa Weak Regionally restricted euxassay_012805_18
TS23: tail mesenchyme Weak Regionally restricted euxassay_012805_18
Specimen euxassay_012805_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012805_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012805_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_012805_19
TS23: vibrissa Weak Regionally restricted euxassay_012805_19
TS23: trunk mesenchyme Moderate Regionally restricted euxassay_012805_19
Specimen euxassay_012805_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012805_20
TS23: facial ganglion Weak Regionally restricted euxassay_012805_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_20
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012805_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_20
TS23: vibrissa Weak Regionally restricted euxassay_012805_20
TS23: trunk mesenchyme Moderate Regionally restricted euxassay_012805_20
Specimen euxassay_012805_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012805_21
TS23: facial ganglion Weak Regionally restricted euxassay_012805_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_21
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012805_21
Specimen euxassay_012805_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012805_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_22
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012805_22
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_012805_22
Specimen euxassay_012805_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012805_23
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_012805_23
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory